116 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103376433	RAB25, member RAS oncogene family a. (211 aa)
	LOC103353060	RAB8A, member RAS oncogene family. (206 aa)
	rab4a	RAB4a, member RAS oncogene family. (213 aa)
	LOC103361823	Zgc:171927. (214 aa)
	rab30	RAB30, member RAS oncogene family. (203 aa)
	LOC103355198	Uncharacterized protein. (223 aa)
	rab21	RAB21, member RAS oncogene family. (223 aa)
	LOC103354128	Si:dkey-34d22.5. (222 aa)
	LOC103375385	Uncharacterized protein. (202 aa)
	LOC103372399	Cingulin-like 1. (1234 aa)
	LOC103353614	Uncharacterized protein. (221 aa)
	ptar1	Protein prenyltransferase alpha subunit repeat containing 1. (417 aa)
	LOC103362358	RAB25, member RAS oncogene family b. (208 aa)
	LOC103360788	RAB3A, member RAS oncogene family, b. (219 aa)
	rabl2b	RAB, member of RAS oncogene family-like 2. (213 aa)
	rab3d	RAB3D, member RAS oncogene family, b. (222 aa)
	LOC103366835	Uncharacterized protein. (218 aa)
	ENSSPAP00000015045	Si:ch211-247i17.1. (84 aa)
	LOC103369105	RAB3B, member RAS oncogene family. (217 aa)
	ENSSPAP00000014896	Uncharacterized protein. (217 aa)
	LOC103372379	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. (550 aa)
	rab37	Uncharacterized protein. (245 aa)
	ENSSPAP00000014501	RAB39B, member RAS oncogene family. (205 aa)
	LOC103355771	Uncharacterized protein. (213 aa)
	LOC103355770	Zgc:162171. (247 aa)
	rab12	RAB12, member RAS oncogene family. (243 aa)
	LOC103375967	RAB38c, member of RAS oncogene family. (222 aa)
	LOC103368560	Zgc:162879. (600 aa)
	rab23	RAB23, member RAS oncogene family. (235 aa)
	LOC103375295	Uncharacterized protein. (242 aa)
	ptp4a1	Protein tyrosine phosphatase 4A1. (173 aa)
	LOC103360106	RAB6B, member RAS oncogene family. (208 aa)
	dnajc27	DnaJ (Hsp40) homolog, subfamily C, member 27. (273 aa)
	LOC103370166	RAB40B, member RAS oncogene family. (282 aa)
	rab35	RAB35, member RAS oncogene family b. (201 aa)
	RAB9A	RAB9A, member RAS oncogene family. (206 aa)
	armc5	Armadillo repeat containing 5. (1262 aa)
	FILIP1L	Filamin A interacting protein 1 like. (1225 aa)
	rab2a	RAB2A, member RAS oncogene family. (202 aa)
	RAB19	RAB19, member RAS oncogene family. (232 aa)
	rab5c	RAB5C, member RAS oncogene family. (220 aa)
	LOC103357227	Zgc:101559. (234 aa)
	LOC103354488	RAB38b, member of RAS oncogene family. (218 aa)
	LOC103363946	Si:dkey-16l2.16. (209 aa)
	rab41	RAB41, member RAS oncogene family. (240 aa)
	rab33a	RAB33A, member RAS oncogene family. (281 aa)
	rab20	RAB20, member RAS oncogene family. (232 aa)
	LOC103366693	RAB40c, member RAS oncogene family. (279 aa)
	rab24	RAB24, member RAS oncogene family. (204 aa)
	LOC103373450	Uncharacterized protein. (215 aa)
	LOC103374601	RAB33B, member RAS oncogene family a. (240 aa)
	rab26	Uncharacterized protein. (252 aa)
	LOC103359439	Protein tyrosine phosphatase 4A2b. (212 aa)
	rab28	Uncharacterized protein. (221 aa)
	ptp4a3	Protein tyrosine phosphatase 4A3b. (178 aa)
	LOC103373389	RAB34, member RAS oncogene family b. (254 aa)
	rasef	RAS and EF-hand domain containing. (831 aa)
	RAB29	RAB29, member RAS oncogene family. (206 aa)
	ENSSPAP00000002516	Uncharacterized protein. (192 aa)
	ENSSPAP00000002407	Uncharacterized protein. (151 aa)
	RAB31	RAB31, member RAS oncogene family. (194 aa)
	LOC103369712	Uncharacterized protein. (224 aa)
	rabggtb	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (331 aa)
	ENSSPAP00000018959	Uncharacterized protein. (160 aa)
	LOC103375457	Uncharacterized protein. (137 aa)
	LOC103366613	Uncharacterized protein. (207 aa)
	LOC103373906	Uncharacterized protein. (174 aa)
	LOC103363273	Uncharacterized protein. (208 aa)
	garem1	GRB2 associated, regulator of MAPK1. (870 aa)
	LOC103373893	RAB3C, member RAS oncogene family. (218 aa)
	LOC103369709	RAB3A, member RAS oncogene family. (219 aa)
	LOC103369191	Uncharacterized protein. (218 aa)
	ENSSPAP00000019828	RAB10, member RAS oncogene family. (202 aa)
	rab15	RAB15, member RAS oncogene family. (213 aa)
	rab1a	Uncharacterized protein. (228 aa)
	LOC103376428	RAB5A, member RAS oncogene family, a. (216 aa)
	rab5a	RAB5A, member RAS oncogene family, b. (216 aa)
	rab4b	RAB4B, member RAS oncogene family. (230 aa)
	rabggta	Rab geranylgeranyltransferase subunit alpha. (583 aa)
	ENSSPAP00000021245	Uncharacterized protein. (88 aa)
	LOC103363630	RAB42, member RAS oncogene family a. (218 aa)
	rab10	RAB10, member RAS oncogene family. (219 aa)
	RAB8A	RAB8A, member RAS oncogene family. (209 aa)
	garem2	GRB2 associated, regulator of MAPK1-like. (722 aa)
	LOC103367528	RAB5B, member RAS oncogene family. (216 aa)
	rab8b	Multiple EGF-like-domains 8. (190 aa)
	LOC103370860	RAB11B, member RAS oncogene family, a. (218 aa)
	rab34	RAB34, member RAS oncogene family a. (275 aa)
	LOC103354239	RAB6B, member RAS oncogene family a. (208 aa)
	rab27a	RAB27A, member RAS oncogene family. (220 aa)
	fam189a2	Family with sequence similarity 189 member A2. (606 aa)
	RAB40C	RAB40C, member RAS oncogene family. (292 aa)
	LOC103375538	RAB18A, member RAS oncogene family. (191 aa)
	LOC103360036	Uncharacterized protein. (1398 aa)
	LOC103370801	RAB36, member RAS oncogene family. (257 aa)
	zhx2	Zinc fingers and homeoboxes 2a. (907 aa)
	pter	Phosphotriesterase related. (340 aa)
	LOC103370843	CortBP2 domain-containing protein. (1004 aa)
	rab11a	RAB11A, member RAS oncogene family. (203 aa)
	LOC103365838	Protein tyrosine phosphatase 4A2a. (168 aa)
	fam189a1	Family with sequence similarity 189 member A1. (534 aa)
	LOC103364208	RAB32b, member RAS oncogene family. (219 aa)
	RAB38	RAB38, member RAS oncogene family. (212 aa)
	LOC103354336	RAB18B, member RAS oncogene family. (205 aa)
	rabl6	RAB, member RAS oncogene family-like 6b. (726 aa)
	LOC103365899	Si:dkey-13a21.4. (194 aa)
	rab22a	RAB22A, member RAS oncogene family. (194 aa)
	LOC103364286	Uncharacterized protein. (1051 aa)
	LOC103364288	RAB3C, member RAS oncogene family. (219 aa)
	rab13	Uncharacterized protein. (200 aa)
	fam189b	Si:dkey-7f3.9. (714 aa)
	LOC103370946	Uncharacterized protein. (224 aa)
	LOC103373258	ZRAB1B, member RAS oncogene family a. (204 aa)
	rab14	RAB14, member RAS oncogene family. (215 aa)
	LOC103363130	RAB15, member RAS oncogene family. (212 aa)
	LOC103359881	RAB7a, member RAS oncogene family. (207 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000002407	LOC103372379	ENSSPAP00000002407	ENSSPAP00000014717	Uncharacterized protein.	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.	0.732
ENSSPAP00000002407	ptar1	ENSSPAP00000002407	ENSSPAP00000016017	Uncharacterized protein.	Protein prenyltransferase alpha subunit repeat containing 1.	0.723
ENSSPAP00000002407	rabggta	ENSSPAP00000002407	ENSSPAP00000021078	Uncharacterized protein.	Rab geranylgeranyltransferase subunit alpha.	0.723
ENSSPAP00000002407	rabggtb	ENSSPAP00000002407	ENSSPAP00000018852	Uncharacterized protein.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.721
ENSSPAP00000002516	LOC103353614	ENSSPAP00000002516	ENSSPAP00000016094	Uncharacterized protein.	Uncharacterized protein.	0.526
ENSSPAP00000002516	LOC103359881	ENSSPAP00000002516	ENSSPAP00000031133	Uncharacterized protein.	RAB7a, member RAS oncogene family.	0.415
ENSSPAP00000002516	LOC103360788	ENSSPAP00000002516	ENSSPAP00000015473	Uncharacterized protein.	RAB3A, member RAS oncogene family, b.	0.527
ENSSPAP00000002516	LOC103364288	ENSSPAP00000002516	ENSSPAP00000029001	Uncharacterized protein.	RAB3C, member RAS oncogene family.	0.527
ENSSPAP00000002516	LOC103366613	ENSSPAP00000002516	ENSSPAP00000001863	Uncharacterized protein.	Uncharacterized protein.	0.415
ENSSPAP00000002516	LOC103369105	ENSSPAP00000002516	ENSSPAP00000014979	Uncharacterized protein.	RAB3B, member RAS oncogene family.	0.528
ENSSPAP00000002516	LOC103369709	ENSSPAP00000002516	ENSSPAP00000000006	Uncharacterized protein.	RAB3A, member RAS oncogene family.	0.527
ENSSPAP00000002516	LOC103370946	ENSSPAP00000002516	ENSSPAP00000030105	Uncharacterized protein.	Uncharacterized protein.	0.415
ENSSPAP00000002516	LOC103372379	ENSSPAP00000002516	ENSSPAP00000014717	Uncharacterized protein.	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.	0.698
ENSSPAP00000002516	LOC103373450	ENSSPAP00000002516	ENSSPAP00000006663	Uncharacterized protein.	Uncharacterized protein.	0.434
ENSSPAP00000002516	LOC103373893	ENSSPAP00000002516	ENSSPAP00000000977	Uncharacterized protein.	RAB3C, member RAS oncogene family.	0.528
ENSSPAP00000002516	RAB29	ENSSPAP00000002516	ENSSPAP00000002668	Uncharacterized protein.	RAB29, member RAS oncogene family.	0.450
ENSSPAP00000002516	ptar1	ENSSPAP00000002516	ENSSPAP00000016017	Uncharacterized protein.	Protein prenyltransferase alpha subunit repeat containing 1.	0.597
ENSSPAP00000002516	rab14	ENSSPAP00000002516	ENSSPAP00000030546	Uncharacterized protein.	RAB14, member RAS oncogene family.	0.434
ENSSPAP00000002516	rab21	ENSSPAP00000002516	ENSSPAP00000017221	Uncharacterized protein.	RAB21, member RAS oncogene family.	0.447
ENSSPAP00000002516	rab2a	ENSSPAP00000002516	ENSSPAP00000008677	Uncharacterized protein.	RAB2A, member RAS oncogene family.	0.459