17 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	infgr1	Fibronectin type-III domain-containing protein. (411 aa)
	LOC103357838	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (593 aa)
	ifngr1l	Uncharacterized protein. (389 aa)
	LOC103370704	Uncharacterized protein. (218 aa)
	ifna21	Uncharacterized protein. (160 aa)
	LOC103355603	Interfer-bind domain-containing protein. (199 aa)
	LOC103355582	Uncharacterized protein. (416 aa)
	ENSSPAP00000006900	Fibronectin type-III domain-containing protein. (334 aa)
	ptpn6	Protein tyrosine phosphatase non-receptor type 6. (570 aa)
	LOC103361030	Uncharacterized protein. (564 aa)
	ENSSPAP00000028283	Uncharacterized protein. (180 aa)
	usp18	Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family. (339 aa)
	ENSSPAP00000021168	Uncharacterized protein. (125 aa)
	jak1	Tyrosine-protein kinase. (1177 aa)
	ptpn1	Tyrosine-protein phosphatase non-receptor type. (438 aa)
	stat2	Signal transducer and activator of transcription. (815 aa)
	ptpn11	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (602 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000006900	ENSSPAP00000021168	ENSSPAP00000006900	ENSSPAP00000021168	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.804
ENSSPAP00000006900	ENSSPAP00000028283	ENSSPAP00000006900	ENSSPAP00000028283	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.804
ENSSPAP00000006900	LOC103355603	ENSSPAP00000006900	ENSSPAP00000006933	Fibronectin type-III domain-containing protein.	Interfer-bind domain-containing protein.	0.897
ENSSPAP00000006900	LOC103357838	ENSSPAP00000006900	ENSSPAP00000012523	Fibronectin type-III domain-containing protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.527
ENSSPAP00000006900	LOC103361030	ENSSPAP00000006900	ENSSPAP00000003939	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.877
ENSSPAP00000006900	LOC103370704	ENSSPAP00000006900	ENSSPAP00000012426	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.638
ENSSPAP00000006900	ifna21	ENSSPAP00000006900	ENSSPAP00000009750	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.917
ENSSPAP00000006900	ifngr1l	ENSSPAP00000006900	ENSSPAP00000012454	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.851
ENSSPAP00000006900	infgr1	ENSSPAP00000006900	ENSSPAP00000014026	Fibronectin type-III domain-containing protein.	Fibronectin type-III domain-containing protein.	0.756
ENSSPAP00000006900	jak1	ENSSPAP00000006900	ENSSPAP00000019984	Fibronectin type-III domain-containing protein.	Tyrosine-protein kinase.	0.866
ENSSPAP00000006900	ptpn11	ENSSPAP00000006900	ENSSPAP00000015764	Fibronectin type-III domain-containing protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.527
ENSSPAP00000006900	ptpn6	ENSSPAP00000006900	ENSSPAP00000005164	Fibronectin type-III domain-containing protein.	Protein tyrosine phosphatase non-receptor type 6.	0.527
ENSSPAP00000006900	stat2	ENSSPAP00000006900	ENSSPAP00000017208	Fibronectin type-III domain-containing protein.	Signal transducer and activator of transcription.	0.800
ENSSPAP00000006900	usp18	ENSSPAP00000006900	ENSSPAP00000025911	Fibronectin type-III domain-containing protein.	Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.	0.457
ENSSPAP00000021168	ENSSPAP00000006900	ENSSPAP00000021168	ENSSPAP00000006900	Uncharacterized protein.	Fibronectin type-III domain-containing protein.	0.804
ENSSPAP00000021168	LOC103355582	ENSSPAP00000021168	ENSSPAP00000006912	Uncharacterized protein.	Uncharacterized protein.	0.837
ENSSPAP00000021168	LOC103355603	ENSSPAP00000021168	ENSSPAP00000006933	Uncharacterized protein.	Interfer-bind domain-containing protein.	0.817
ENSSPAP00000021168	ifna21	ENSSPAP00000021168	ENSSPAP00000009750	Uncharacterized protein.	Uncharacterized protein.	0.749
ENSSPAP00000021168	ifngr1l	ENSSPAP00000021168	ENSSPAP00000012454	Uncharacterized protein.	Uncharacterized protein.	0.824
ENSSPAP00000021168	jak1	ENSSPAP00000021168	ENSSPAP00000019984	Uncharacterized protein.	Tyrosine-protein kinase.	0.404