50 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tapbp	TAP binding protein (tapasin), tandem duplicate 2. (447 aa)
	sec23a	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (764 aa)
	LOC103356397	Cugbp, Elav-like family member 3a. (433 aa)
	LOC103375196	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (283 aa)
	LOC103356123	TAP binding protein like. (423 aa)
	LOC103361631	Calmegin. (637 aa)
	LOC103374028	Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family. (640 aa)
	LOC103356677	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. (141 aa)
	ENSSPAP00000008932	Ig-like domain-containing protein; Belongs to the MHC class I family. (298 aa)
	ENSSPAP00000009046	Ankyrin repeat domain 45. (230 aa)
	ENSSPAP00000010428	RRM domain-containing protein. (131 aa)
	LOC103355116	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. (116 aa)
	ENSSPAP00000011915	Ig-like domain-containing protein; Belongs to the MHC class I family. (281 aa)
	LOC103355135	Secretion associated, Ras related GTPase 1Ab; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
	LOC103368527	Ig-like domain-containing protein; Belongs to the MHC class I family. (302 aa)
	LOC103374203	Ig-like domain-containing protein; Belongs to the MHC class I family. (283 aa)
	calr3	Calreticulin. (428 aa)
	LOC103373066	VWFA domain-containing protein. (780 aa)
	LOC103364574	SEC24 homolog B, COPII coat complex component. (1221 aa)
	sec13	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (338 aa)
	erap1	Aminopeptidase. (939 aa)
	LOC103353071	Calreticulin 3b. (270 aa)
	LOC103362419	Si:dkey-9k7.3. (522 aa)
	LOC103357398	Si:dkey-205h23.2. (436 aa)
	tap1	Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP). (732 aa)
	LOC103375488	Ig-like domain-containing protein; Belongs to the MHC class I family. (396 aa)
	sec31b	SEC31 homolog B, COPII coat complex component. (1225 aa)
	LOC103362473	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
	hspa5	Heat shock protein 5; Belongs to the heat shock protein 70 family. (686 aa)
	ENSSPAP00000021974	Uncharacterized protein. (120 aa)
	tap2	Transporter associated with antigen processing, subunit type a. (719 aa)
	LOC103371331	SEC24 homolog C, COPII coat complex component. (960 aa)
	bcap31	B cell receptor associated protein 31. (231 aa)
	sar1b	Secretion associated, Ras related GTPase 1B; Belongs to the small GTPase superfamily. SAR1 family. (198 aa)
	LOC103368718	SEC24 homolog A, COPII coat complex component. (1131 aa)
	sec23b	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (767 aa)
	LOC103370401	Calreticulin. (431 aa)
	celf4	CUGBP, Elav-like family member 4. (427 aa)
	LOC103365291	Cugbp, Elav-like family member 3b. (495 aa)
	ENSSPAP00000026627	Ig-like domain-containing protein; Belongs to the MHC class I family. (371 aa)
	ENSSPAP00000027119	MHC_I-like_Ag-recog domain-containing protein. (276 aa)
	pdia3	Protein disulfide-isomerase. (496 aa)
	ENSSPAP00000027476	MHC_I-like_Ag-recog domain-containing protein; Belongs to the MHC class I family. (168 aa)
	bcap29	B cell receptor associated protein 29. (269 aa)
	LOC103371473	Protein disulfide-isomerase A4-like. (640 aa)
	sec31a	SEC31 homolog A, COPII coat complex component. (1383 aa)
	celf5	Cugbp, Elav-like family member 5a. (451 aa)
	erap2	Aminopeptidase. (945 aa)
	sec24d	SEC24 homolog D, COPII coat complex component. (1028 aa)
	canx	Calnexin. (623 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000008932	ENSSPAP00000009046	ENSSPAP00000008932	ENSSPAP00000009046	Ig-like domain-containing protein; Belongs to the MHC class I family.	Ankyrin repeat domain 45.	0.505
ENSSPAP00000008932	ENSSPAP00000021974	ENSSPAP00000008932	ENSSPAP00000021974	Ig-like domain-containing protein; Belongs to the MHC class I family.	Uncharacterized protein.	0.601
ENSSPAP00000008932	ENSSPAP00000027119	ENSSPAP00000008932	ENSSPAP00000027119	Ig-like domain-containing protein; Belongs to the MHC class I family.	MHC_I-like_Ag-recog domain-containing protein.	0.734
ENSSPAP00000008932	ENSSPAP00000027476	ENSSPAP00000008932	ENSSPAP00000027476	Ig-like domain-containing protein; Belongs to the MHC class I family.	MHC_I-like_Ag-recog domain-containing protein; Belongs to the MHC class I family.	0.837
ENSSPAP00000008932	LOC103353071	ENSSPAP00000008932	ENSSPAP00000017954	Ig-like domain-containing protein; Belongs to the MHC class I family.	Calreticulin 3b.	0.888
ENSSPAP00000008932	LOC103355116	ENSSPAP00000008932	ENSSPAP00000011349	Ig-like domain-containing protein; Belongs to the MHC class I family.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.951
ENSSPAP00000008932	LOC103356123	ENSSPAP00000008932	ENSSPAP00000004968	Ig-like domain-containing protein; Belongs to the MHC class I family.	TAP binding protein like.	0.659
ENSSPAP00000008932	LOC103356677	ENSSPAP00000008932	ENSSPAP00000005751	Ig-like domain-containing protein; Belongs to the MHC class I family.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.951
ENSSPAP00000008932	LOC103361631	ENSSPAP00000008932	ENSSPAP00000005087	Ig-like domain-containing protein; Belongs to the MHC class I family.	Calmegin.	0.587
ENSSPAP00000008932	LOC103370401	ENSSPAP00000008932	ENSSPAP00000024092	Ig-like domain-containing protein; Belongs to the MHC class I family.	Calreticulin.	0.888
ENSSPAP00000008932	LOC103371473	ENSSPAP00000008932	ENSSPAP00000027807	Ig-like domain-containing protein; Belongs to the MHC class I family.	Protein disulfide-isomerase A4-like.	0.743
ENSSPAP00000008932	LOC103374028	ENSSPAP00000008932	ENSSPAP00000005730	Ig-like domain-containing protein; Belongs to the MHC class I family.	Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.	0.743
ENSSPAP00000008932	LOC103374203	ENSSPAP00000008932	ENSSPAP00000014218	Ig-like domain-containing protein; Belongs to the MHC class I family.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.767
ENSSPAP00000008932	LOC103375488	ENSSPAP00000008932	ENSSPAP00000019816	Ig-like domain-containing protein; Belongs to the MHC class I family.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.901
ENSSPAP00000008932	calr3	ENSSPAP00000008932	ENSSPAP00000014462	Ig-like domain-containing protein; Belongs to the MHC class I family.	Calreticulin.	0.884
ENSSPAP00000008932	canx	ENSSPAP00000008932	ENSSPAP00000031306	Ig-like domain-containing protein; Belongs to the MHC class I family.	Calnexin.	0.587
ENSSPAP00000008932	erap1	ENSSPAP00000008932	ENSSPAP00000017016	Ig-like domain-containing protein; Belongs to the MHC class I family.	Aminopeptidase.	0.501
ENSSPAP00000008932	erap2	ENSSPAP00000008932	ENSSPAP00000029144	Ig-like domain-containing protein; Belongs to the MHC class I family.	Aminopeptidase.	0.501
ENSSPAP00000008932	hspa5	ENSSPAP00000008932	ENSSPAP00000021929	Ig-like domain-containing protein; Belongs to the MHC class I family.	Heat shock protein 5; Belongs to the heat shock protein 70 family.	0.601
ENSSPAP00000008932	pdia3	ENSSPAP00000008932	ENSSPAP00000027310	Ig-like domain-containing protein; Belongs to the MHC class I family.	Protein disulfide-isomerase.	0.883