(9 nodes) Ubiquitin carboxyl-terminal hydrolase network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103360793	Ubiquitin specific peptidase 53b. (1028 aa)
	ENSSPAP00000001186	USP domain-containing protein. (308 aa)
	LOC103358823	Cylindromatosis (turban tumor syndrome), b. (681 aa)
	LOC103359995	Ubiquitin specific peptidase 43b; Belongs to the peptidase C19 family. (1095 aa)
	ENSSPAP00000009340	USP domain-containing protein. (342 aa)
	ENSSPAP00000010598	USP domain-containing protein; Belongs to the peptidase C19 family. (105 aa)
	LOC103357298	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family. (773 aa)
	cyld	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (917 aa)
	usp43	Ubiquitin specific peptidase 43a; Belongs to the peptidase C19 family. (1157 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103357298	LOC103358823	ENSSPAP00000011276	ENSSPAP00000002372	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	Cylindromatosis (turban tumor syndrome), b.	0.834
LOC103357298	cyld	ENSSPAP00000011276	ENSSPAP00000026507	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.836
LOC103358823	LOC103357298	ENSSPAP00000002372	ENSSPAP00000011276	Cylindromatosis (turban tumor syndrome), b.	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	0.834
LOC103358823	cyld	ENSSPAP00000002372	ENSSPAP00000026507	Cylindromatosis (turban tumor syndrome), b.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.840
cyld	LOC103357298	ENSSPAP00000026507	ENSSPAP00000011276	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	0.836
cyld	LOC103358823	ENSSPAP00000026507	ENSSPAP00000002372	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	Cylindromatosis (turban tumor syndrome), b.	0.840