(24 nodes) Troponin network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSPAP00000005064	Troponin I, skeletal, slow c. (199 aa)
	LOC103358650	Troponin T type 1 (skeletal, slow). (314 aa)
	ENSSPAP00000023610	Uncharacterized protein. (245 aa)
	LOC103355871	Troponin I type 1b (skeletal, slow). (185 aa)
	ENSSPAP00000002371	Troponin T type 2b (cardiac). (218 aa)
	LOC103375603	Uncharacterized protein. (298 aa)
	LOC103374597	Uncharacterized protein. (189 aa)
	TNNT1	Troponin T1, slow skeletal type. (279 aa)
	ENSSPAP00000009174	Troponin T type 3a (skeletal, fast). (272 aa)
	LOC103357253	Troponin I2, fast skeletal type. (170 aa)
	LOC103357253-2	Uncharacterized protein. (172 aa)
	LOC103357252	Uncharacterized protein. (181 aa)
	LOC103357251	Troponin I2, fast skeletal type. (171 aa)
	LOC103357254	Troponin I type 2a (skeletal, fast), tandem duplicate 2. (156 aa)
	LOC103357255	Troponin I type 2a (skeletal, fast), tandem duplicate 1. (178 aa)
	TNNI2	Troponin I2, fast skeletal type. (176 aa)
	LOC103366858	Uncharacterized protein. (274 aa)
	LOC103366863	Troponin I4b, tandem duplicate 2. (180 aa)
	ENSSPAP00000016165	Uncharacterized protein. (169 aa)
	LOC103366865	Troponin I4b, tandem duplicate 2. (179 aa)
	ENSSPAP00000026867	Uncharacterized protein. (324 aa)
	ENSSPAP00000030718	Troponin T2c, cardiac. (246 aa)
	ENSSPAP00000031368	Troponin T type 2a (cardiac). (231 aa)
	tnni1	Troponin I type 1a (skeletal, slow). (187 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000002371	ENSSPAP00000005064	ENSSPAP00000002371	ENSSPAP00000005064	Troponin T type 2b (cardiac).	Troponin I, skeletal, slow c.	0.886
ENSSPAP00000002371	ENSSPAP00000009174	ENSSPAP00000002371	ENSSPAP00000009174	Troponin T type 2b (cardiac).	Troponin T type 3a (skeletal, fast).	0.530
ENSSPAP00000002371	ENSSPAP00000016165	ENSSPAP00000002371	ENSSPAP00000016165	Troponin T type 2b (cardiac).	Uncharacterized protein.	0.901
ENSSPAP00000002371	ENSSPAP00000023610	ENSSPAP00000002371	ENSSPAP00000023610	Troponin T type 2b (cardiac).	Uncharacterized protein.	0.537
ENSSPAP00000002371	ENSSPAP00000026867	ENSSPAP00000002371	ENSSPAP00000026867	Troponin T type 2b (cardiac).	Uncharacterized protein.	0.935
ENSSPAP00000002371	ENSSPAP00000030718	ENSSPAP00000002371	ENSSPAP00000030718	Troponin T type 2b (cardiac).	Troponin T2c, cardiac.	0.879
ENSSPAP00000002371	ENSSPAP00000031368	ENSSPAP00000002371	ENSSPAP00000031368	Troponin T type 2b (cardiac).	Troponin T type 2a (cardiac).	0.935
ENSSPAP00000002371	LOC103355871	ENSSPAP00000002371	ENSSPAP00000002348	Troponin T type 2b (cardiac).	Troponin I type 1b (skeletal, slow).	0.938
ENSSPAP00000002371	LOC103357251	ENSSPAP00000002371	ENSSPAP00000009293	Troponin T type 2b (cardiac).	Troponin I2, fast skeletal type.	0.884
ENSSPAP00000002371	LOC103357252	ENSSPAP00000002371	ENSSPAP00000009282	Troponin T type 2b (cardiac).	Uncharacterized protein.	0.860
ENSSPAP00000002371	LOC103357253	ENSSPAP00000002371	ENSSPAP00000009219	Troponin T type 2b (cardiac).	Troponin I2, fast skeletal type.	0.860
ENSSPAP00000002371	LOC103357253-2	ENSSPAP00000002371	ENSSPAP00000009241	Troponin T type 2b (cardiac).	Uncharacterized protein.	0.884
ENSSPAP00000002371	LOC103357254	ENSSPAP00000002371	ENSSPAP00000009302	Troponin T type 2b (cardiac).	Troponin I type 2a (skeletal, fast), tandem duplicate 2.	0.825
ENSSPAP00000002371	LOC103357255	ENSSPAP00000002371	ENSSPAP00000009320	Troponin T type 2b (cardiac).	Troponin I type 2a (skeletal, fast), tandem duplicate 1.	0.885
ENSSPAP00000002371	LOC103358650	ENSSPAP00000002371	ENSSPAP00000022792	Troponin T type 2b (cardiac).	Troponin T type 1 (skeletal, slow).	0.522
ENSSPAP00000002371	LOC103366858	ENSSPAP00000002371	ENSSPAP00000016043	Troponin T type 2b (cardiac).	Uncharacterized protein.	0.845
ENSSPAP00000002371	LOC103366863	ENSSPAP00000002371	ENSSPAP00000016131	Troponin T type 2b (cardiac).	Troponin I4b, tandem duplicate 2.	0.905
ENSSPAP00000002371	LOC103366865	ENSSPAP00000002371	ENSSPAP00000016189	Troponin T type 2b (cardiac).	Troponin I4b, tandem duplicate 2.	0.909
ENSSPAP00000002371	LOC103374597	ENSSPAP00000002371	ENSSPAP00000006003	Troponin T type 2b (cardiac).	Uncharacterized protein.	0.887
ENSSPAP00000002371	LOC103375603	ENSSPAP00000002371	ENSSPAP00000026019	Troponin T type 2b (cardiac).	Uncharacterized protein.	0.535