(19 nodes) Sulfotransferase family network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	chst11	Carbohydrate sulfotransferase. (352 aa)
	hs2st1	Heparan sulfate 2-O-sulfotransferase 1a. (361 aa)
	LOC103352818	Carbohydrate sulfotransferase. (338 aa)
	gal3st4	Galactose-3-O-sulfotransferase 4. (513 aa)
	gal3st3	Galactose-3-O-sulfotransferase 3. (439 aa)
	hs6st3	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (438 aa)
	LOC103374067	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (470 aa)
	ust	Uronyl 2-sulfotransferase a. (319 aa)
	LOC103360067	Carbohydrate sulfotransferase. (415 aa)
	LOC103365674	Heparan sulfate 2-O-sulfotransferase 1b. (357 aa)
	chst10	Carbohydrate sulfotransferase. (362 aa)
	chst14	Carbohydrate sulfotransferase. (373 aa)
	LOC103354587	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (437 aa)
	CHST13	Carbohydrate sulfotransferase. (339 aa)
	chst12	Carbohydrate sulfotransferase. (424 aa)
	ENSSPAP00000020185	Galactose-3-O-sulfotransferase 2. (398 aa)
	CHST8	Carbohydrate sulfotransferase. (369 aa)
	LOC103353793	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (428 aa)
	LOC103365996	Carbohydrate sulfotransferase. (402 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHST13	chst10	ENSSPAP00000014283	ENSSPAP00000012081	Carbohydrate sulfotransferase.	Carbohydrate sulfotransferase.	0.512
CHST13	chst11	ENSSPAP00000014283	ENSSPAP00000031083	Carbohydrate sulfotransferase.	Carbohydrate sulfotransferase.	0.819
CHST13	chst12	ENSSPAP00000014283	ENSSPAP00000017822	Carbohydrate sulfotransferase.	Carbohydrate sulfotransferase.	0.764
CHST8	LOC103365996	ENSSPAP00000027365	ENSSPAP00000031253	Carbohydrate sulfotransferase.	Carbohydrate sulfotransferase.	0.833
CHST8	chst11	ENSSPAP00000027365	ENSSPAP00000031083	Carbohydrate sulfotransferase.	Carbohydrate sulfotransferase.	0.821
LOC103352818	chst10	ENSSPAP00000005264	ENSSPAP00000012081	Carbohydrate sulfotransferase.	Carbohydrate sulfotransferase.	0.512
LOC103352818	chst11	ENSSPAP00000005264	ENSSPAP00000031083	Carbohydrate sulfotransferase.	Carbohydrate sulfotransferase.	0.819
LOC103352818	chst12	ENSSPAP00000005264	ENSSPAP00000017822	Carbohydrate sulfotransferase.	Carbohydrate sulfotransferase.	0.762
LOC103353793	LOC103354587	ENSSPAP00000028353	ENSSPAP00000012822	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	0.802
LOC103353793	LOC103365674	ENSSPAP00000028353	ENSSPAP00000011933	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Heparan sulfate 2-O-sulfotransferase 1b.	0.419
LOC103353793	hs2st1	ENSSPAP00000028353	ENSSPAP00000001915	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Heparan sulfate 2-O-sulfotransferase 1a.	0.419
LOC103354587	LOC103353793	ENSSPAP00000012822	ENSSPAP00000028353	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	0.802
LOC103354587	LOC103365674	ENSSPAP00000012822	ENSSPAP00000011933	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Heparan sulfate 2-O-sulfotransferase 1b.	0.419
LOC103354587	LOC103374067	ENSSPAP00000012822	ENSSPAP00000009104	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	0.803
LOC103354587	hs2st1	ENSSPAP00000012822	ENSSPAP00000001915	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Heparan sulfate 2-O-sulfotransferase 1a.	0.419
LOC103354587	hs6st3	ENSSPAP00000012822	ENSSPAP00000008278	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	0.899
LOC103360067	chst10	ENSSPAP00000010542	ENSSPAP00000012081	Carbohydrate sulfotransferase.	Carbohydrate sulfotransferase.	0.667
LOC103360067	chst12	ENSSPAP00000010542	ENSSPAP00000017822	Carbohydrate sulfotransferase.	Carbohydrate sulfotransferase.	0.900
LOC103365674	LOC103353793	ENSSPAP00000011933	ENSSPAP00000028353	Heparan sulfate 2-O-sulfotransferase 1b.	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	0.419
LOC103365674	LOC103354587	ENSSPAP00000011933	ENSSPAP00000012822	Heparan sulfate 2-O-sulfotransferase 1b.	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	0.419