(18 nodes) Porin activity, and Cell pole network (Ectothiorhodospira sp. BSL9)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANB01514.1	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
	ANB03674.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
	ANB01806.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa)
	ANB03680.1	Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
	ANB03742.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
	ANB02361.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (71 aa)
	ANB02362.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
	ANB02363.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)
	ANB02364.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (63 aa)
	ANB03776.1	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. (63 aa)
	ANB02449.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
	ANB02699.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
	ANB02701.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
	ANB02919.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the skp family. (172 aa)
	ANB03099.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (68 aa)
	ANB03158.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
	ANB03288.1	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (703 aa)
	ANB03461.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)

Your Current Organism:

Ectothiorhodospira sp. BSL9

NCBI taxonomy Id: 1442136
Other names: E. sp. BSL-9, Ectothiorhodospira sp. BSL-9

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANB01514.1	ANB02361.1	ECTOBSL9_0638	ECTOBSL9_1731	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.622
ANB01514.1	ANB02701.1	ECTOBSL9_0638	ECTOBSL9_2158	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598
ANB01514.1	ANB03288.1	ECTOBSL9_0638	ECTOBSL9_2906	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.518
ANB01806.1	ANB02362.1	ECTOBSL9_1012	ECTOBSL9_1732	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.411
ANB01806.1	ANB02699.1	ECTOBSL9_1012	ECTOBSL9_2156	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.411
ANB01806.1	ANB03680.1	ECTOBSL9_1012	ECTOBSL9_1016	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.411
ANB01806.1	ANB03742.1	ECTOBSL9_1012	ECTOBSL9_1476	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.411
ANB02361.1	ANB01514.1	ECTOBSL9_1731	ECTOBSL9_0638	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.622
ANB02361.1	ANB02362.1	ECTOBSL9_1731	ECTOBSL9_1732	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.693
ANB02361.1	ANB02363.1	ECTOBSL9_1731	ECTOBSL9_1733	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.822
ANB02361.1	ANB02364.1	ECTOBSL9_1731	ECTOBSL9_1734	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
ANB02361.1	ANB03461.1	ECTOBSL9_1731	ECTOBSL9_3121	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.439
ANB02362.1	ANB01806.1	ECTOBSL9_1732	ECTOBSL9_1012	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.411
ANB02362.1	ANB02361.1	ECTOBSL9_1732	ECTOBSL9_1731	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.693
ANB02362.1	ANB02363.1	ECTOBSL9_1732	ECTOBSL9_1733	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937
ANB02362.1	ANB02364.1	ECTOBSL9_1732	ECTOBSL9_1734	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.477
ANB02362.1	ANB02919.1	ECTOBSL9_1732	ECTOBSL9_2442	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the skp family.	0.476
ANB02362.1	ANB03776.1	ECTOBSL9_1732	ECTOBSL9_1735	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.	0.458
ANB02363.1	ANB02361.1	ECTOBSL9_1733	ECTOBSL9_1731	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.822
ANB02363.1	ANB02362.1	ECTOBSL9_1733	ECTOBSL9_1732	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937