(5 nodes) ATPase family associated with various cellular activities (AAA), and Predicted AAA-ATPase network (Ectothiorhodospira sp. BSL9)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANB02232.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa)
	ANB02738.1	CyrO; Derived by automated computational analysis using gene prediction method: Protein Homology. (531 aa)
	ANB03147.1	CyrO; Derived by automated computational analysis using gene prediction method: Protein Homology. (532 aa)
	ANB03149.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa)
	ANB03150.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa)

Your Current Organism:

Ectothiorhodospira sp. BSL9

NCBI taxonomy Id: 1442136
Other names: E. sp. BSL-9, Ectothiorhodospira sp. BSL-9

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANB02232.1	ANB02738.1	ECTOBSL9_1575	ECTOBSL9_2202	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CyrO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.726
ANB02232.1	ANB03147.1	ECTOBSL9_1575	ECTOBSL9_2727	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CyrO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.730
ANB02738.1	ANB02232.1	ECTOBSL9_2202	ECTOBSL9_1575	CyrO; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.726
ANB02738.1	ANB03149.1	ECTOBSL9_2202	ECTOBSL9_2729	CyrO; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.727
ANB02738.1	ANB03150.1	ECTOBSL9_2202	ECTOBSL9_2730	CyrO; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
ANB03147.1	ANB02232.1	ECTOBSL9_2727	ECTOBSL9_1575	CyrO; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.730
ANB03147.1	ANB03149.1	ECTOBSL9_2727	ECTOBSL9_2729	CyrO; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
ANB03147.1	ANB03150.1	ECTOBSL9_2727	ECTOBSL9_2730	CyrO; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.730
ANB03149.1	ANB02738.1	ECTOBSL9_2729	ECTOBSL9_2202	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CyrO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.727
ANB03149.1	ANB03147.1	ECTOBSL9_2729	ECTOBSL9_2727	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CyrO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
ANB03150.1	ANB02738.1	ECTOBSL9_2730	ECTOBSL9_2202	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CyrO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
ANB03150.1	ANB03147.1	ECTOBSL9_2730	ECTOBSL9_2727	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CyrO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.730