88 items (Fonsecaea pedrosoi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z517_12151	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (210 aa)
	Z517_12366	Unplaced genomic scaffold supercont1.9, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL3 family. (436 aa)
	Z517_11571	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL15 family. (149 aa)
	Z517_11882	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (150 aa)
	Z517_10167	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (254 aa)
	Z517_10242	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (213 aa)
	Z517_10393	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (63 aa)
	Z517_10751	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (157 aa)
	Z517_09045	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (316 aa)
	Z517_08550	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (1062 aa)
	Z517_08555	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (822 aa)
	Z517_08841	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (1548 aa)
	Z517_08921	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS3 family. (264 aa)
	Z517_07142	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (69 aa)
	Z517_07187	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	Z517_04306	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (134 aa)
	Z517_04516	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (205 aa)
	Z517_05413	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL13 family. (201 aa)
	Z517_02154	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (121 aa)
	Z517_11773	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	Z517_11818	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL11 family. (167 aa)
	Z517_11889	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (367 aa)
	Z517_10495	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (152 aa)
	Z517_08435	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (158 aa)
	Z517_08536	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (108 aa)
	Z517_08877	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (533 aa)
	Z517_06251	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (372 aa)
	Z517_04372	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (133 aa)
	Z517_04442	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (130 aa)
	Z517_04578	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (98 aa)
	Z517_05644	40S ribosomal protein S27. (345 aa)
	Z517_02000	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (1105 aa)
	Z517_02255	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence; Belongs to the eukaryotic ribosomal protein eL38 family. (81 aa)
	Z517_02532	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (102 aa)
	Z517_02627	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	Z517_03782	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (358 aa)
	Z517_01536	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (225 aa)
	Z517_10683	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS12 family. (146 aa)
	Z517_12150	Unplaced genomic scaffold supercont1.9, whole genome shotgun sequence. (217 aa)
	Z517_11284	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (178 aa)
	Z517_11932	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (189 aa)
	Z517_10106	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (149 aa)
	Z517_07480	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (439 aa)
	Z517_07561	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
	Z517_10750	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (588 aa)
	Z517_08436	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS4 family. (193 aa)
	Z517_08537	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (227 aa)
	Z517_08727	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (240 aa)
	Z517_09936	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (203 aa)
	Z517_07543	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (264 aa)
	Z517_06948	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (316 aa)
	Z517_07089	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS5 family. (261 aa)
	Z517_08749	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (262 aa)
	Z517_12464	Unplaced genomic scaffold supercont1.10, whole genome shotgun sequence. (123 aa)
	Z517_12164	Unplaced genomic scaffold supercont1.9, whole genome shotgun sequence. (300 aa)
	Z517_07046	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS17 family. (162 aa)
	Z517_02839	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS19 family. (163 aa)
	Z517_11901	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (116 aa)
	Z517_12078	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (154 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (284 aa)
	Z517_04591	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL22 family. (188 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (257 aa)
	Z517_03818	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence; Belongs to the universal ribosomal protein uL5 family. (175 aa)
	Z517_05597	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence; Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)
	Z517_00568	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	Z517_02399	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (620 aa)
	Z517_00980	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
	Z517_01447	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (131 aa)
	Z517_01537	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (458 aa)
	Z517_00063	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (92 aa)
	Z517_08280	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (905 aa)
	Z517_08372	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (720 aa)
	Z517_08437	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (300 aa)
	Z517_08558	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (148 aa)
	Z517_00570	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	Z517_00605	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (225 aa)
	Z517_07155	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (352 aa)
	Z517_04419	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (117 aa)
	Z517_04900	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (1000 aa)
	Z517_05141	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (138 aa)
	Z517_05356	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (358 aa)
	Z517_05541	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (195 aa)
	Z517_02327	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (107 aa)
	Z517_02719	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (109 aa)
	Z517_02764	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (548 aa)
	Z517_02840	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	Z517_00734	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (150 aa)
	Z517_00799	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS7 family. (215 aa)

Your Current Organism:

Fonsecaea pedrosoi

NCBI taxonomy Id: 1442368
Other names: F. pedrosoi CBS 271.37, Fonsecaea pedrosoi CBS 271.37

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPS0	RPS1	A0A0D2GSI6	A0A0D2GST6	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
RPS0	Z517_00063	A0A0D2GSI6	A0A0D2H1A9	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.998
RPS0	Z517_00568	A0A0D2GSI6	A0A0D2GW10	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS11 family.	0.999
RPS0	Z517_00570	A0A0D2GSI6	A0A0D2H2W5	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS9 family.	0.999
RPS0	Z517_00605	A0A0D2GSI6	A0A0D2H2Z1	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.999
RPS0	Z517_00734	A0A0D2GSI6	A0A0D2HLI3	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.999
RPS0	Z517_00799	A0A0D2GSI6	A0A0D2HLQ9	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS7 family.	0.999
RPS0	Z517_00980	A0A0D2GSI6	A0A0D2GX43	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.989
RPS0	Z517_01447	A0A0D2GSI6	A0A0D2GYE6	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.998
RPS0	Z517_01536	A0A0D2GSI6	A0A0D2FHI8	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.983
RPS0	Z517_01537	A0A0D2GSI6	A0A0D2GYL3	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.983
RPS0	Z517_02000	A0A0D2GSI6	A0A0D2F839	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.992
RPS0	Z517_02154	A0A0D2GSI6	A0A0D2DYR5	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
RPS0	Z517_02255	A0A0D2GSI6	A0A0D2F8V5	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence; Belongs to the eukaryotic ribosomal protein eL38 family.	0.998
RPS0	Z517_02327	A0A0D2GSI6	A0A0D2HF93	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.998
RPS0	Z517_02399	A0A0D2GSI6	A0A0D2GWZ4	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.999
RPS0	Z517_02532	A0A0D2GSI6	A0A0D2F9G3	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.998
RPS0	Z517_02627	A0A0D2GSI6	A0A0D2F9S7	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.	0.999
RPS0	Z517_02719	A0A0D2GSI6	A0A0D2HGC6	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.998
RPS0	Z517_02764	A0A0D2GSI6	A0A0D2HGJ2	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.989