(62 nodes) Maturation of SSU-rRNA network (Fonsecaea pedrosoi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z517_00693	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (972 aa)
	Z517_10175	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (328 aa)
	Z517_03319	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (648 aa)
	Z517_10849	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (1256 aa)
	Z517_11105	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (533 aa)
	Z517_00532	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (532 aa)
	Z517_00568	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	Z517_00570	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	Z517_01585	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (1793 aa)
	Z517_07145	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (194 aa)
	Z517_04359	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (135 aa)
	Z517_04595	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (676 aa)
	Z517_02277	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (999 aa)
	Z517_02834	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (902 aa)
	NAT10	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1116 aa)
	Z517_03709	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (1011 aa)
	Z517_01021	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (271 aa)
	Z517_01141	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (725 aa)
	Z517_01493	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (383 aa)
	Z517_02321	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (95 aa)
	Z517_02281	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (597 aa)
	Z517_02236	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (281 aa)
	Z517_02146	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (236 aa)
	Z517_12209	Unplaced genomic scaffold supercont1.9, whole genome shotgun sequence. (835 aa)
	Z517_12514	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (395 aa)
	Z517_05029	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (895 aa)
	Z517_04829	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	Z517_04614	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (758 aa)
	Z517_04378	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (1112 aa)
	Z517_03916	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (407 aa)
	Z517_07309	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (443 aa)
	Z517_07279	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (390 aa)
	Z517_06853	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (433 aa)
	Z517_07783	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (1179 aa)
	Z517_06633	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (888 aa)
	Z517_06573	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (444 aa)
	Z517_09826	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (221 aa)
	Z517_11525	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (394 aa)
	Z517_12370	Unplaced genomic scaffold supercont1.9, whole genome shotgun sequence. (1277 aa)
	Z517_10583	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (225 aa)
	Z517_10224	Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (193 aa)
	Z517_11398	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (414 aa)
	Z517_12213	Unplaced genomic scaffold supercont1.9, whole genome shotgun sequence. (934 aa)
	Z517_02627	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	Z517_02220	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (274 aa)
	Z517_04402	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (131 aa)
	Z517_03900	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (336 aa)
	Z517_06752	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (725 aa)
	Z517_08485	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (849 aa)
	Z517_09026	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (564 aa)
	Z517_12477	Unplaced genomic scaffold supercont1.10, whole genome shotgun sequence. (294 aa)
	Z517_01198	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (608 aa)
	Z517_03501	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (159 aa)
	Z517_02355	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (930 aa)
	Z517_05468	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (443 aa)
	Z517_04722	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (598 aa)
	Z517_07252	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence; Belongs to the DEAD box helicase family. (486 aa)
	Z517_07142	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (69 aa)
	Z517_09772	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (559 aa)
	TSR3	Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family. (396 aa)
	Z517_12156	Unplaced genomic scaffold supercont1.9, whole genome shotgun sequence. (688 aa)
	Z517_12151	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (210 aa)

Your Current Organism:

Fonsecaea pedrosoi

NCBI taxonomy Id: 1442368
Other names: F. pedrosoi CBS 271.37, Fonsecaea pedrosoi CBS 271.37

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NAT10	TSR3	A0A0D2HHL4	A0A0D2DC96	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family.	0.454
NAT10	Z517_00532	A0A0D2HHL4	A0A0D2GVZ0	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.998
NAT10	Z517_00568	A0A0D2HHL4	A0A0D2GW10	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS11 family.	0.920
NAT10	Z517_00570	A0A0D2HHL4	A0A0D2H2W5	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS9 family.	0.916
NAT10	Z517_00693	A0A0D2HHL4	A0A0D2GWB5	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.992
NAT10	Z517_01021	A0A0D2HHL4	A0A0D2HME4	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.879
NAT10	Z517_01141	A0A0D2HHL4	A0A0D2HMR7	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.986
NAT10	Z517_01198	A0A0D2HHL4	A0A0D2E6R9	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.762
NAT10	Z517_01493	A0A0D2HHL4	A0A0D2HNR3	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.754
NAT10	Z517_01585	A0A0D2HHL4	A0A0D2H5P7	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.995
NAT10	Z517_02146	A0A0D2HHL4	A0A0D2GPJ5	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.802
NAT10	Z517_02220	A0A0D2HHL4	A0A0D2F8S3	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.969
NAT10	Z517_02236	A0A0D2HHL4	A0A0D2GPV4	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.645
NAT10	Z517_02277	A0A0D2HHL4	A0A0D2HF62	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.996
NAT10	Z517_02281	A0A0D2HHL4	A0A0D2GQ08	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.995
NAT10	Z517_02355	A0A0D2HHL4	A0A0D2DZA4	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.998
NAT10	Z517_02627	A0A0D2HHL4	A0A0D2F9S7	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence; Belongs to the universal ribosomal protein uS15 family.	0.938
NAT10	Z517_02834	A0A0D2HHL4	A0A0D2HGN8	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.998
NAT10	Z517_03319	A0A0D2HHL4	A0A0D2GSW0	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.998
NAT10	Z517_03501	A0A0D2HHL4	A0A0D2E2F1	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.555