27 items (Fonsecaea pedrosoi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z517_10539	Protein MAK16; Belongs to the MAK16 family. (325 aa)
	Z517_03295	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (457 aa)
	Z517_05681	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (241 aa)
	Z517_01399	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (400 aa)
	Z517_01222	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (700 aa)
	Z517_05866	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (337 aa)
	Z517_07852	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (685 aa)
	Z517_01699	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (284 aa)
	Z517_01015	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (756 aa)
	Z517_10185	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (443 aa)
	Z517_04520	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (560 aa)
	Z517_02146	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (236 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (676 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (789 aa)
	Z517_07913	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4882 aa)
	Z517_06292	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (277 aa)
	Z517_07851	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
	Z517_07656	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence; Belongs to the DEAD box helicase family. (785 aa)
	Z517_11856	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (107 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (834 aa)
	Z517_01698	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (368 aa)
	Z517_03577	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (595 aa)
	Z517_05864	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (351 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (466 aa)
	Z517_09497	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (261 aa)
	Z517_00262	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (707 aa)
	Z517_00759	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (661 aa)

Your Current Organism:

Fonsecaea pedrosoi

NCBI taxonomy Id: 1442368
Other names: F. pedrosoi CBS 271.37, Fonsecaea pedrosoi CBS 271.37

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	NOP7	A0A0D2GJ48	A0A0D2GP97	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	SPB1	A0A0D2GJ48	A0A0D2FIN1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.995
ERB1	YTM1	A0A0D2GJ48	A0A0D2DHM5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	Z517_00262	A0A0D2GJ48	A0A0D2HK47	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.996
ERB1	Z517_00759	A0A0D2GJ48	A0A0D2HLL4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.996
ERB1	Z517_01015	A0A0D2GJ48	A0A0D2GX61	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.880
ERB1	Z517_01222	A0A0D2GJ48	A0A0D2H4L4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.886
ERB1	Z517_01399	A0A0D2GJ48	A0A0D2H595	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.996
ERB1	Z517_01698	A0A0D2GJ48	A0A0D2FHY3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.791
ERB1	Z517_01699	A0A0D2GJ48	A0A0D2GZ20	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.793
ERB1	Z517_02146	A0A0D2GJ48	A0A0D2GPJ5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.843
ERB1	Z517_03295	A0A0D2GJ48	A0A0D2HI19	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.984
ERB1	Z517_03577	A0A0D2GJ48	A0A0D2FCH1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.991
ERB1	Z517_04520	A0A0D2GJ48	A0A0D2GSJ4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence.	0.999
ERB1	Z517_05681	A0A0D2GJ48	A0A0D2HDU6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence.	0.992
ERB1	Z517_05864	A0A0D2GJ48	A0A0D2EYG9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.980
ERB1	Z517_05866	A0A0D2GJ48	A0A0D2H3L8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.987
ERB1	Z517_06292	A0A0D2GJ48	A0A0D2GFU0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.907
ERB1	Z517_07656	A0A0D2GJ48	A0A0D2GB08	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence; Belongs to the DEAD box helicase family.	0.972
ERB1	Z517_07851	A0A0D2GJ48	A0A0D2GBP1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.991