(17 nodes) Spindle assembly network (Fonsecaea pedrosoi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z517_04798	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (530 aa)
	Z517_11282	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (1275 aa)
	Z517_04491	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (825 aa)
	Z517_12472	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (455 aa)
	Z517_11667	Spindle pole body component. (951 aa)
	Z517_06351	Spindle pole body component. (903 aa)
	Z517_00070	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (611 aa)
	Z517_07099	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1210 aa)
	Z517_05265	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (892 aa)
	Z517_02663	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (843 aa)
	Z517_04033	Spindle pole body component. (904 aa)
	Z517_05332	Spindle pole body component. (768 aa)
	Z517_00678	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (377 aa)
	Z517_07552	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (247 aa)
	Z517_00478	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (621 aa)
	Z517_00901	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (775 aa)
	Z517_02594	Serine/threonine-protein kinase. (1071 aa)

Your Current Organism:

Fonsecaea pedrosoi

NCBI taxonomy Id: 1442368
Other names: F. pedrosoi CBS 271.37, Fonsecaea pedrosoi CBS 271.37

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z517_00070	Z517_00478	A0A0D2FDI4	A0A0D2H2M9	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.434
Z517_00070	Z517_07099	A0A0D2FDI4	A0A0D2GI54	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.533
Z517_00478	Z517_00070	A0A0D2H2M9	A0A0D2FDI4	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.434
Z517_00478	Z517_07099	A0A0D2H2M9	A0A0D2GI54	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.591
Z517_00678	Z517_02663	A0A0D2GWA6	A0A0D2GR10	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.436
Z517_00678	Z517_04033	A0A0D2GWA6	A0A0D2GR43	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Spindle pole body component.	0.402
Z517_00678	Z517_05265	A0A0D2GWA6	A0A0D2GMP4	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence.	0.690
Z517_00678	Z517_07099	A0A0D2GWA6	A0A0D2GI54	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.986
Z517_00678	Z517_07552	A0A0D2GWA6	A0A0D2GZ54	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence.	0.784
Z517_00678	Z517_12472	A0A0D2GWA6	A0A0D2EI97	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.704
Z517_00901	Z517_05265	A0A0D2H3T0	A0A0D2GMP4	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence.	0.430
Z517_00901	Z517_07099	A0A0D2H3T0	A0A0D2GI54	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.426
Z517_00901	Z517_07552	A0A0D2H3T0	A0A0D2GZ54	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence.	0.515
Z517_00901	Z517_11282	A0A0D2H3T0	A0A0D2DFS1	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence.	0.431
Z517_02594	Z517_02663	A0A0D2HFY2	A0A0D2GR10	Serine/threonine-protein kinase.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.691
Z517_02594	Z517_05265	A0A0D2HFY2	A0A0D2GMP4	Serine/threonine-protein kinase.	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence.	0.916
Z517_02594	Z517_07099	A0A0D2HFY2	A0A0D2GI54	Serine/threonine-protein kinase.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.867
Z517_02594	Z517_07552	A0A0D2HFY2	A0A0D2GZ54	Serine/threonine-protein kinase.	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence.	0.730
Z517_02594	Z517_11282	A0A0D2HFY2	A0A0D2DFS1	Serine/threonine-protein kinase.	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence.	0.792
Z517_02594	Z517_12472	A0A0D2HFY2	A0A0D2EI97	Serine/threonine-protein kinase.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.777