16 items (Fonsecaea pedrosoi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z517_09903	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (362 aa)
	Z517_03487	Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family. (565 aa)
	Z517_06859	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (528 aa)
	Z517_06624	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (801 aa)
	Z517_09033	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (461 aa)
	Z517_05622	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family. (395 aa)
	Z517_10814	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (251 aa)
	Z517_05167	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (231 aa)
	Z517_10492	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family. (328 aa)
	Z517_03998	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (642 aa)
	Z517_11513	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (939 aa)
	Z517_10810	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (587 aa)
	Z517_11246	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (476 aa)
	Z517_05665	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (268 aa)
	Z517_10247	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (525 aa)
	Z517_01218	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (522 aa)

Your Current Organism:

Fonsecaea pedrosoi

NCBI taxonomy Id: 1442368
Other names: F. pedrosoi CBS 271.37, Fonsecaea pedrosoi CBS 271.37

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z517_01218	Z517_03487	A0A0D2E6T7	A0A0D2FC79	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.	0.744
Z517_01218	Z517_03998	A0A0D2E6T7	A0A0D2GQY7	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.	0.477
Z517_01218	Z517_06624	A0A0D2E6T7	A0A0D2H602	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.477
Z517_01218	Z517_06859	A0A0D2E6T7	A0A0D2H6E9	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.871
Z517_01218	Z517_09033	A0A0D2E6T7	A0A0D2GW71	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence.	0.745
Z517_01218	Z517_09903	A0A0D2E6T7	A0A0D2ETB1	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence.	0.796
Z517_01218	Z517_10247	A0A0D2E6T7	A0A0D2DD25	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.737
Z517_01218	Z517_11246	A0A0D2E6T7	A0A0D2GCX3	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.737
Z517_01218	Z517_11513	A0A0D2E6T7	A0A0D2G1Q8	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence.	0.808
Z517_03487	Z517_01218	A0A0D2FC79	A0A0D2E6T7	Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.744
Z517_03487	Z517_03998	A0A0D2FC79	A0A0D2GQY7	Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.	0.477
Z517_03487	Z517_06624	A0A0D2FC79	A0A0D2H602	Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.477
Z517_03487	Z517_06859	A0A0D2FC79	A0A0D2H6E9	Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.806
Z517_03487	Z517_09903	A0A0D2FC79	A0A0D2ETB1	Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence.	0.796
Z517_03487	Z517_10247	A0A0D2FC79	A0A0D2DD25	Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.748
Z517_03487	Z517_11246	A0A0D2FC79	A0A0D2GCX3	Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.748
Z517_03487	Z517_11513	A0A0D2FC79	A0A0D2G1Q8	Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence.	0.824
Z517_03998	Z517_01218	A0A0D2GQY7	A0A0D2E6T7	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.477
Z517_03998	Z517_03487	A0A0D2GQY7	A0A0D2FC79	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.	Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.	0.477
Z517_03998	Z517_06624	A0A0D2GQY7	A0A0D2H602	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.989