STRINGSTRING
Z517_09243 Z517_09243 Z517_00961 Z517_00961 Z517_06948 Z517_06948 Z517_12078 Z517_12078 Z517_00960 Z517_00960
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Z517_09243Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (559 aa)
Z517_00961Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (240 aa)
Z517_06948Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (316 aa)
Z517_12078Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (154 aa)
Z517_00960Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (277 aa)
Your Current Organism:
Fonsecaea pedrosoi
NCBI taxonomy Id: 1442368
Other names: F. pedrosoi CBS 271.37, Fonsecaea pedrosoi CBS 271.37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.