STRINGSTRING
Z517_10247 Z517_10247 Z517_04241 Z517_04241 Z517_10883 Z517_10883 Z517_11246 Z517_11246 Z517_08478 Z517_08478 Z517_03246 Z517_03246
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Z517_10247Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (525 aa)
Z517_04241Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (506 aa)
Z517_10883Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (331 aa)
Z517_11246Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (476 aa)
Z517_08478Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (404 aa)
Z517_03246Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (439 aa)
Your Current Organism:
Fonsecaea pedrosoi
NCBI taxonomy Id: 1442368
Other names: F. pedrosoi CBS 271.37, Fonsecaea pedrosoi CBS 271.37
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