26 items (Fonsecaea pedrosoi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z517_08310	Non-specific serine/threonine protein kinase. (872 aa)
	Z517_03438	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (202 aa)
	Z517_10811	Non-specific serine/threonine protein kinase. (890 aa)
	Z517_10871	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (101 aa)
	Z517_06486	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (318 aa)
	Z517_04582	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (567 aa)
	Z517_05543	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (203 aa)
	Z517_03187	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (211 aa)
	Z517_03404	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (296 aa)
	Z517_01485	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (238 aa)
	Z517_06069	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. (273 aa)
	Z517_07268	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (302 aa)
	Z517_00944	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (193 aa)
	Z517_01396	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (287 aa)
	Z517_10528	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (739 aa)
	Z517_10564	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (275 aa)
	Z517_08057	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (907 aa)
	Z517_08488	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (285 aa)
	Z517_11715	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (452 aa)
	Z517_02849	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (302 aa)
	Z517_10950	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (668 aa)
	Z517_09048	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (1221 aa)
	Z517_02223	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (1350 aa)
	Z517_01603	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (566 aa)
	Z517_03061	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (455 aa)
	Z517_07937	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (303 aa)

Your Current Organism:

Fonsecaea pedrosoi

NCBI taxonomy Id: 1442368
Other names: F. pedrosoi CBS 271.37, Fonsecaea pedrosoi CBS 271.37

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same PNG format, but at higher resolution

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z517_00944	Z517_01396	A0A0D2FFU4	A0A0D2FH95	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.763
Z517_00944	Z517_01603	A0A0D2FFU4	A0A0D2GYR4	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.450
Z517_00944	Z517_02223	A0A0D2FFU4	A0A0D2GWJ0	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.738
Z517_00944	Z517_02849	A0A0D2FFU4	A0A0D2GRL0	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.450
Z517_00944	Z517_03061	A0A0D2FFU4	A0A0D2GYX3	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.450
Z517_00944	Z517_03187	A0A0D2FFU4	A0A0D2E1P2	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.840
Z517_00944	Z517_03404	A0A0D2FFU4	A0A0D2E263	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.450
Z517_00944	Z517_03438	A0A0D2FFU4	A0A0D2HIA4	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.798
Z517_00944	Z517_04582	A0A0D2FFU4	A0A0D2DUU4	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence.	0.638
Z517_00944	Z517_05543	A0A0D2FFU4	A0A0D2DXP2	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence.	0.758
Z517_00944	Z517_06069	A0A0D2FFU4	A0A0D2EYX0	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.693
Z517_00944	Z517_06486	A0A0D2FFU4	A0A0D2DQ18	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.450
Z517_00944	Z517_07268	A0A0D2FFU4	A0A0D2F1Z1	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.450
Z517_00944	Z517_07937	A0A0D2FFU4	A0A0D2H0C5	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence.	0.450
Z517_00944	Z517_08057	A0A0D2FFU4	A0A0D2GC33	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence.	0.797
Z517_00944	Z517_08310	A0A0D2FFU4	A0A0D2H1H6	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Non-specific serine/threonine protein kinase.	0.763
Z517_00944	Z517_08488	A0A0D2FFU4	A0A0D2GJB9	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence.	0.450
Z517_00944	Z517_09048	A0A0D2FFU4	A0A0D2GW80	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence.	0.998
Z517_00944	Z517_10528	A0A0D2FFU4	A0A0D2GAB5	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence.	0.626
Z517_00944	Z517_10564	A0A0D2FFU4	A0A0D2GAG0	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence.	0.775