30 items (Fonsecaea pedrosoi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z517_10950	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (668 aa)
	Z517_10318	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (282 aa)
	Z517_11252	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (560 aa)
	Z517_09375	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (107 aa)
	Z517_08545	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (527 aa)
	Z517_02671	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (433 aa)
	Z517_03445	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (604 aa)
	Z517_12522	Unplaced genomic scaffold supercont1.10, whole genome shotgun sequence. (482 aa)
	Z517_10344	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (375 aa)
	Z517_07700	E3 ubiquitin protein ligase. (706 aa)
	Z517_02310	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (318 aa)
	Z517_00501	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (712 aa)
	Z517_11523	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (847 aa)
	Z517_10588	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (686 aa)
	Z517_12525	Unplaced genomic scaffold supercont1.10, whole genome shotgun sequence. (665 aa)
	Z517_10528	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (739 aa)
	Z517_10715	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (440 aa)
	Z517_06923	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (358 aa)
	Z517_08337	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (376 aa)
	Z517_06895	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence; Belongs to the cullin family. (823 aa)
	Z517_02331	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (531 aa)
	Z517_03883	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (542 aa)
	Z517_05462	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (518 aa)
	Z517_00783	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the actin family. (769 aa)
	Z517_02520	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (702 aa)
	Z517_01127	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (644 aa)
	Z517_06714	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (235 aa)
	Z517_06924	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (683 aa)
	Z517_02629	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (297 aa)
	Z517_02729	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (482 aa)

Your Current Organism:

Fonsecaea pedrosoi

NCBI taxonomy Id: 1442368
Other names: F. pedrosoi CBS 271.37, Fonsecaea pedrosoi CBS 271.37

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Export your current network:

... as a bitmap image:

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file format is 'PNG': portable network graphic

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z517_00501	Z517_02629	A0A0D2FEP9	A0A0D2HG17	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.404
Z517_00501	Z517_11523	A0A0D2FEP9	A0A0D2G1R8	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence.	0.968
Z517_00501	Z517_12522	A0A0D2FEP9	A0A0D2EID0	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.10, whole genome shotgun sequence.	0.491
Z517_00783	Z517_02331	A0A0D2GWL4	A0A0D2GQ39	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the actin family.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.667
Z517_00783	Z517_02520	A0A0D2GWL4	A0A0D2GXA8	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the actin family.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.658
Z517_00783	Z517_03883	A0A0D2GWL4	A0A0D2GQL1	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the actin family.	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence.	0.580
Z517_00783	Z517_06714	A0A0D2GWL4	A0A0D2H651	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the actin family.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.518
Z517_00783	Z517_08337	A0A0D2GWL4	A0A0D2GJ35	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the actin family.	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence.	0.744
Z517_00783	Z517_09375	A0A0D2GWL4	A0A0D2DGX5	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the actin family.	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence.	0.658
Z517_00783	Z517_10528	A0A0D2GWL4	A0A0D2GAB5	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the actin family.	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence.	0.692
Z517_00783	Z517_10950	A0A0D2GWL4	A0A0D2GUZ1	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the actin family.	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence.	0.692
Z517_00783	Z517_11252	A0A0D2GWL4	A0A0D2DFP9	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the actin family.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.671
Z517_01127	Z517_02331	A0A0D2H4B4	A0A0D2GQ39	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.626
Z517_01127	Z517_02629	A0A0D2H4B4	A0A0D2HG17	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.522
Z517_01127	Z517_03883	A0A0D2H4B4	A0A0D2GQL1	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence.	0.482
Z517_01127	Z517_06714	A0A0D2H4B4	A0A0D2H651	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.680
Z517_01127	Z517_07700	A0A0D2H4B4	A0A0D2EUE7	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	E3 ubiquitin protein ligase.	0.451
Z517_01127	Z517_10344	A0A0D2H4B4	A0A0D2EMI3	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence.	0.500
Z517_01127	Z517_11252	A0A0D2H4B4	A0A0D2DFP9	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.657
Z517_01127	Z517_11523	A0A0D2H4B4	A0A0D2G1R8	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence.	0.453