39 items (Fonsecaea pedrosoi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z517_03945	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (308 aa)
	Z517_12010	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (412 aa)
	Z517_10308	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (249 aa)
	Z517_11755	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (463 aa)
	Z517_04994	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (345 aa)
	Z517_04889	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (270 aa)
	Z517_08960	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence; Belongs to the protein kinase superfamily. (494 aa)
	Z517_08569	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (222 aa)
	Z517_06322	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (220 aa)
	Z517_07856	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (581 aa)
	Z517_10820	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (626 aa)
	Z517_09654	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (252 aa)
	Z517_11886	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (357 aa)
	Z517_11535	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (541 aa)
	Z517_12027	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (228 aa)
	Z517_03672	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (166 aa)
	Z517_04978	Serine/threonine-protein phosphatase. (329 aa)
	Z517_07318	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (302 aa)
	Z517_08596	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
	Z517_11233	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (542 aa)
	Z517_10349	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (1116 aa)
	Z517_10314	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (486 aa)
	Z517_12237	Unplaced genomic scaffold supercont1.9, whole genome shotgun sequence. (680 aa)
	Z517_04972	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (541 aa)
	Z517_06163	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (259 aa)
	Z517_08881	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (751 aa)
	Z517_09235	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (604 aa)
	Z517_11227	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (508 aa)
	Z517_00961	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (240 aa)
	Z517_04795	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (674 aa)
	Z517_06849	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (625 aa)
	Z517_05996	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (425 aa)
	Z517_05881	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (119 aa)
	Z517_08919	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (624 aa)
	Z517_01145	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (371 aa)
	Z517_00960	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (277 aa)
	Z517_09243	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (559 aa)
	Z517_10664	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (442 aa)
	Z517_12078	Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (154 aa)

Your Current Organism:

Fonsecaea pedrosoi

NCBI taxonomy Id: 1442368
Other names: F. pedrosoi CBS 271.37, Fonsecaea pedrosoi CBS 271.37

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same PNG format, but at higher resolution

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z517_00960	Z517_00961	A0A0D2GX33	A0A0D2HM98	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.556
Z517_00960	Z517_04972	A0A0D2GX33	A0A0D2DVX9	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence.	0.904
Z517_00960	Z517_04978	A0A0D2GX33	A0A0D2F5I8	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Serine/threonine-protein phosphatase.	0.649
Z517_00960	Z517_05996	A0A0D2GX33	A0A0D2H408	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.599
Z517_00960	Z517_08919	A0A0D2GX33	A0A0D2H3A3	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence.	0.620
Z517_00960	Z517_09235	A0A0D2GX33	A0A0D2DGH9	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence.	0.636
Z517_00960	Z517_10349	A0A0D2GX33	A0A0D2EMI7	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence.	0.636
Z517_00961	Z517_00960	A0A0D2HM98	A0A0D2GX33	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	0.556
Z517_00961	Z517_04972	A0A0D2HM98	A0A0D2DVX9	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence.	0.904
Z517_00961	Z517_04978	A0A0D2HM98	A0A0D2F5I8	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Serine/threonine-protein phosphatase.	0.649
Z517_00961	Z517_05996	A0A0D2HM98	A0A0D2H408	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.599
Z517_00961	Z517_08919	A0A0D2HM98	A0A0D2H3A3	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence.	0.620
Z517_00961	Z517_09235	A0A0D2HM98	A0A0D2DGH9	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence.	0.636
Z517_00961	Z517_10349	A0A0D2HM98	A0A0D2EMI7	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence.	0.636
Z517_01145	Z517_03672	A0A0D2GXE1	A0A0D2FCU0	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence.	0.764
Z517_01145	Z517_03945	A0A0D2GXE1	A0A0D2F2R5	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence.	0.878
Z517_01145	Z517_04994	A0A0D2GXE1	A0A0D2GM08	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence.	0.879
Z517_01145	Z517_05881	A0A0D2GXE1	A0A0D2H3N2	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.878
Z517_01145	Z517_06849	A0A0D2GXE1	A0A0D2H6E2	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence.	0.878
Z517_01145	Z517_07856	A0A0D2GXE1	A0A0D2GBP4	Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence.	Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence.	0.878