STRINGSTRING
Z517_04829 Z517_04829 Z517_11742 Z517_11742 Z517_10162 Z517_10162 Z517_10831 Z517_10831 Z517_10861 Z517_10861 Z517_03884 Z517_03884 Z517_04552 Z517_04552 Z517_05303 Z517_05303 Z517_05468 Z517_05468 Z517_02355 Z517_02355 Z517_03393 Z517_03393 Z517_03696 Z517_03696 Z517_00079 Z517_00079 Z517_00591 Z517_00591 Z517_00958 Z517_00958 Z517_01198 Z517_01198 Z517_01556 Z517_01556 Z517_12212 Z517_12212 Z517_12227 Z517_12227 Z517_11292 Z517_11292 Z517_10374 Z517_10374 Z517_10592 Z517_10592 Z517_09116 Z517_09116 Z517_09306 Z517_09306 Z517_09483 Z517_09483 Z517_08611 Z517_08611 Z517_08651 Z517_08651 Z517_05794 Z517_05794 Z517_06572 Z517_06572 Z517_03885 Z517_03885 Z517_04452 Z517_04452 Z517_04953 Z517_04953 TIF6 TIF6 Z517_03577 Z517_03577 Z517_00125 Z517_00125 Z517_12213 Z517_12213 Z517_11498 Z517_11498 Z517_11518 Z517_11518 Z517_10224 Z517_10224 Z517_10583 Z517_10583 Z517_11525 Z517_11525 Z517_09142 Z517_09142 Z517_11676 Z517_11676 Z517_12014 Z517_12014 Z517_09839 Z517_09839 Z517_07661 Z517_07661 Z517_10760 Z517_10760 Z517_08335 Z517_08335 Z517_08441 Z517_08441 Z517_09961 Z517_09961 Z517_06573 Z517_06573 Z517_06633 Z517_06633 Z517_07783 Z517_07783 Z517_07913 Z517_07913 Z517_07395 Z517_07395 Z517_03916 Z517_03916 Z517_04378 Z517_04378 Z517_05175 Z517_05175 Z517_05385 Z517_05385 Z517_06655 Z517_06655 Z517_06950 Z517_06950 Z517_03074 Z517_03074 Z517_03169 Z517_03169 Z517_03179 Z517_03179 Z517_04520 Z517_04520 Z517_03319 Z517_03319 Z517_10376 Z517_10376 Z517_04991 Z517_04991 Z517_05332 Z517_05332 Z517_05432 Z517_05432 Z517_10980 Z517_10980 Z517_11105 Z517_11105 Z517_09008 Z517_09008 Z517_00693 Z517_00693 Z517_09108 Z517_09108 Z517_01015 Z517_01015 Z517_02790 Z517_02790 Z517_01397 Z517_01397 Z517_01653 Z517_01653 Z517_00033 Z517_00033 Z517_00957 Z517_00957 Z517_06318 Z517_06318 Z517_06879 Z517_06879 Z517_07145 Z517_07145 Z517_04284 Z517_04284 Z517_05446 Z517_05446 Z517_05471 Z517_05471 Z517_02277 Z517_02277 Z517_02524 Z517_02524 Z517_03075 Z517_03075 NAT10 NAT10 Z517_03709 Z517_03709 Z517_00412 Z517_00412 Z517_00493 Z517_00493 Z517_00589 Z517_00589 Z517_00759 Z517_00759 Z517_01111 Z517_01111 Z517_01141 Z517_01141 Z517_01206 Z517_01206 Z517_01493 Z517_01493 Z517_01679 Z517_01679
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Z517_04829Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
Z517_11742U3 small nucleolar RNA-associated protein 22. (1141 aa)
Z517_10162Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (1065 aa)
Z517_10831Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (392 aa)
Z517_10861Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (483 aa)
Z517_03884Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (514 aa)
Z517_04552Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (254 aa)
Z517_05303Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (244 aa)
Z517_05468Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (443 aa)
Z517_02355Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (930 aa)
Z517_033935'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1049 aa)
Z517_03696Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (714 aa)
Z517_00079Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (373 aa)
Z517_00591Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (468 aa)
Z517_00958Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (691 aa)
Z517_01198Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (608 aa)
Z517_01556Ribonuclease P protein subunit. (266 aa)
Z517_12212Unplaced genomic scaffold supercont1.9, whole genome shotgun sequence. (964 aa)
Z517_12227Unplaced genomic scaffold supercont1.9, whole genome shotgun sequence. (1072 aa)
Z517_11292Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (314 aa)
Z517_10374Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (467 aa)
Z517_10592Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (445 aa)
Z517_09116Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (303 aa)
Z517_09306Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (564 aa)
Z517_09483Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence; Belongs to the protein kinase superfamily. (315 aa)
Z517_08611Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (109 aa)
Z517_08651Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (328 aa)
Z517_05794Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (296 aa)
Z517_06572Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (64 aa)
Z517_03885Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (225 aa)
Z517_04452Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (750 aa)
Z517_04953Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (781 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (248 aa)
Z517_03577Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (595 aa)
Z517_00125Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (1908 aa)
Z517_12213Unplaced genomic scaffold supercont1.9, whole genome shotgun sequence. (934 aa)
Z517_11498Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (565 aa)
Z517_11518H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (165 aa)
Z517_10224Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (193 aa)
Z517_10583Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (225 aa)
Z517_11525Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (394 aa)
Z517_09142Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (351 aa)
Z517_11676Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (791 aa)
Z517_12014Unplaced genomic scaffold supercont1.8, whole genome shotgun sequence. (1207 aa)
Z517_09839Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (520 aa)
Z517_07661Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (451 aa)
Z517_10760Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (689 aa)
Z517_08335Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (767 aa)
Z517_08441Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence; Belongs to the protein kinase superfamily. (349 aa)
Z517_09961Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (188 aa)
Z517_0657320S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (444 aa)
Z517_06633Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (888 aa)
Z517_07783Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence. (1179 aa)
Z517_07913Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4882 aa)
Z517_07395Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (299 aa)
Z517_03916Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (407 aa)
Z517_04378Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (1112 aa)
Z517_05175Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (129 aa)
Z517_05385Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (738 aa)
Z517_066555'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1406 aa)
Z517_06950Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (599 aa)
Z517_03074Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence; Belongs to the protein kinase superfamily. (342 aa)
Z517_03169Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (260 aa)
Z517_03179Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (180 aa)
Z517_04520Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (560 aa)
Z517_03319Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (648 aa)
Z517_10376Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (131 aa)
Z517_0499160S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (516 aa)
Z517_05332Spindle pole body component. (768 aa)
Z517_05432Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence; Belongs to the protein kinase superfamily. (373 aa)
Z517_10980Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (1136 aa)
Z517_11105Unplaced genomic scaffold supercont1.7, whole genome shotgun sequence. (533 aa)
Z517_09008Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (620 aa)
Z517_00693Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (972 aa)
Z517_09108Unplaced genomic scaffold supercont1.6, whole genome shotgun sequence. (642 aa)
Z517_01015Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (756 aa)
Z517_02790Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (745 aa)
Z517_01397Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (430 aa)
Z517_01653Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (1105 aa)
Z517_00033Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (304 aa)
Z517_00957Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (487 aa)
Z517_06318Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence; Belongs to the iron/ascorbate-dependent oxidoreductase family. (367 aa)
Z517_06879Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (260 aa)
Z517_07145Unplaced genomic scaffold supercont1.4, whole genome shotgun sequence. (194 aa)
Z517_04284Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (705 aa)
Z517_05446Unplaced genomic scaffold supercont1.3, whole genome shotgun sequence. (132 aa)
Z517_05471Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (321 aa)
Z517_02277Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (999 aa)
Z517_02524Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (453 aa)
Z517_03075Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (360 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1116 aa)
Z517_03709Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence. (1011 aa)
Z517_00412GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)
Z517_00493Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence; Belongs to the iron/ascorbate-dependent oxidoreductase family. (387 aa)
Z517_00589Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (1022 aa)
Z517_00759Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (661 aa)
Z517_01111Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (319 aa)
Z517_01141U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (725 aa)
Z517_01206Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (697 aa)
Z517_01493Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (383 aa)
Z517_01679Unplaced genomic scaffold supercont1.1, whole genome shotgun sequence. (188 aa)
Your Current Organism:
Fonsecaea pedrosoi
NCBI taxonomy Id: 1442368
Other names: F. pedrosoi CBS 271.37, Fonsecaea pedrosoi CBS 271.37
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