(12 nodes) HOPS complex, and Endosomal vesicle fusion network (Rhinocladiella mackenziei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_04853	annotation not available (1287 aa)
	Z518_01093	annotation not available (963 aa)
	Z518_02006	annotation not available (1182 aa)
	Z518_02141	annotation not available (1019 aa)
	Z518_03400	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (830 aa)
	Z518_01350	annotation not available (372 aa)
	Z518_07700	annotation not available (716 aa)
	Z518_10977	E3 ubiquitin-protein ligase PEP5. (980 aa)
	Z518_09126	annotation not available (1556 aa)
	Z518_09482	Belongs to the STXBP/unc-18/SEC1 family. (660 aa)
	Z518_08567	annotation not available (321 aa)
	Z518_04386	Belongs to the STXBP/unc-18/SEC1 family. (592 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z518_01093	Z518_01350	A0A0D2G5F2	A0A0D2HHU9	annotation not available	annotation not available	0.976
Z518_01093	Z518_02006	A0A0D2G5F2	A0A0D2HA45	annotation not available	annotation not available	0.995
Z518_01093	Z518_02141	A0A0D2G5F2	A0A0D2HAK2	annotation not available	annotation not available	0.997
Z518_01093	Z518_03400	A0A0D2G5F2	A0A0D2HDV6	annotation not available	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.997
Z518_01093	Z518_04386	A0A0D2G5F2	A0A0D2JBC2	annotation not available	Belongs to the STXBP/unc-18/SEC1 family.	0.861
Z518_01093	Z518_04853	A0A0D2G5F2	A0A0D2FX18	annotation not available	annotation not available	0.997
Z518_01093	Z518_07700	A0A0D2G5F2	A0A0D2ILS9	annotation not available	annotation not available	0.673
Z518_01093	Z518_08567	A0A0D2G5F2	A0A0D2J176	annotation not available	annotation not available	0.768
Z518_01093	Z518_09126	A0A0D2G5F2	A0A0D2IXV0	annotation not available	annotation not available	0.989
Z518_01093	Z518_09482	A0A0D2G5F2	A0A0D2IYQ6	annotation not available	Belongs to the STXBP/unc-18/SEC1 family.	0.997
Z518_01093	Z518_10977	A0A0D2G5F2	A0A0D2ITL3	annotation not available	E3 ubiquitin-protein ligase PEP5.	0.998
Z518_01350	Z518_01093	A0A0D2HHU9	A0A0D2G5F2	annotation not available	annotation not available	0.976
Z518_01350	Z518_02006	A0A0D2HHU9	A0A0D2HA45	annotation not available	annotation not available	0.944
Z518_01350	Z518_02141	A0A0D2HHU9	A0A0D2HAK2	annotation not available	annotation not available	0.944
Z518_01350	Z518_04386	A0A0D2HHU9	A0A0D2JBC2	annotation not available	Belongs to the STXBP/unc-18/SEC1 family.	0.762
Z518_01350	Z518_04853	A0A0D2HHU9	A0A0D2FX18	annotation not available	annotation not available	0.972
Z518_01350	Z518_08567	A0A0D2HHU9	A0A0D2J176	annotation not available	annotation not available	0.676
Z518_01350	Z518_09126	A0A0D2HHU9	A0A0D2IXV0	annotation not available	annotation not available	0.925
Z518_01350	Z518_09482	A0A0D2HHU9	A0A0D2IYQ6	annotation not available	Belongs to the STXBP/unc-18/SEC1 family.	0.978
Z518_01350	Z518_10977	A0A0D2HHU9	A0A0D2ITL3	annotation not available	E3 ubiquitin-protein ligase PEP5.	0.972