(23 nodes) Sphingolipid metabolism network (Rhinocladiella mackenziei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_11334	annotation not available (313 aa)
	Z518_06774	annotation not available (344 aa)
	Z518_04056	annotation not available (505 aa)
	Z518_04778	Neutral ceramidase. (764 aa)
	Z518_00205	annotation not available (412 aa)
	Z518_00532	annotation not available (515 aa)
	Z518_11340	annotation not available (560 aa)
	Z518_08449	Neutral ceramidase. (755 aa)
	Z518_03892	annotation not available (741 aa)
	Z518_04223	annotation not available (693 aa)
	Z518_11093	annotation not available (569 aa)
	Z518_10868	annotation not available (344 aa)
	Z518_06206	annotation not available (575 aa)
	Z518_02067	Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily. (395 aa)
	Z518_03255	annotation not available (434 aa)
	Z518_02550	Belongs to the sterol desaturase family. (440 aa)
	Z518_06505	annotation not available (461 aa)
	Z518_01112	annotation not available (731 aa)
	Z518_07028	annotation not available (302 aa)
	Z518_01523	annotation not available (535 aa)
	Z518_05585	annotation not available (411 aa)
	Z518_02609	annotation not available (319 aa)
	Z518_00158	annotation not available (253 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z518_00158	Z518_00205	A0A0D2JI86	A0A0D2G3H5	annotation not available	annotation not available	0.671
Z518_00158	Z518_00532	A0A0D2JI86	A0A0D2G472	annotation not available	annotation not available	0.826
Z518_00158	Z518_01112	A0A0D2JI86	A0A0D2J316	annotation not available	annotation not available	0.634
Z518_00158	Z518_01523	A0A0D2JI86	A0A0D2J401	annotation not available	annotation not available	0.803
Z518_00158	Z518_02550	A0A0D2JI86	A0A0D2IWZ6	annotation not available	Belongs to the sterol desaturase family.	0.800
Z518_00158	Z518_03255	A0A0D2JI86	A0A0D2IRJ6	annotation not available	annotation not available	0.746
Z518_00158	Z518_03892	A0A0D2JI86	A0A0D2H699	annotation not available	annotation not available	0.509
Z518_00158	Z518_04056	A0A0D2JI86	A0A0D2FVD8	annotation not available	annotation not available	0.669
Z518_00158	Z518_04223	A0A0D2JI86	A0A0D2H766	annotation not available	annotation not available	0.509
Z518_00158	Z518_04778	A0A0D2JI86	A0A0D2FWW9	annotation not available	Neutral ceramidase.	0.743
Z518_00158	Z518_05585	A0A0D2JI86	A0A0D2J6N5	annotation not available	annotation not available	0.495
Z518_00158	Z518_06505	A0A0D2JI86	A0A0D2J232	annotation not available	annotation not available	0.802
Z518_00158	Z518_06774	A0A0D2JI86	A0A0D2FMJ1	annotation not available	annotation not available	0.746
Z518_00158	Z518_07028	A0A0D2JI86	A0A0D2J3F1	annotation not available	annotation not available	0.549
Z518_00158	Z518_08449	A0A0D2JI86	A0A0D2GWD2	annotation not available	Neutral ceramidase.	0.743
Z518_00158	Z518_10868	A0A0D2JI86	A0A0D2I9K1	annotation not available	annotation not available	0.778
Z518_00158	Z518_11093	A0A0D2JI86	A0A0D2I8W0	annotation not available	annotation not available	0.828
Z518_00158	Z518_11334	A0A0D2JI86	A0A0D2FB63	annotation not available	annotation not available	0.647
Z518_00158	Z518_11340	A0A0D2JI86	A0A0D2GLU3	annotation not available	annotation not available	0.654
Z518_00205	Z518_00158	A0A0D2G3H5	A0A0D2JI86	annotation not available	annotation not available	0.671