STRINGSTRING
Z518_11414 Z518_11414 Z518_11084 Z518_11084 Z518_10759 Z518_10759 Z518_10809 Z518_10809 YTM1 YTM1 Z518_09787 Z518_09787 TIF6 TIF6 Z518_06682 Z518_06682 Z518_06779 Z518_06779 Z518_07125 Z518_07125 Z518_07330 Z518_07330 Z518_05673 Z518_05673 Z518_03845 Z518_03845 Z518_04483 Z518_04483 ERB1 ERB1 Z518_02788 Z518_02788 Z518_03344 Z518_03344 Z518_11415 Z518_11415 Z518_10285 Z518_10285 Z518_10442 Z518_10442 Z518_10673 Z518_10673 Z518_09304 Z518_09304 Z518_08434 Z518_08434 Z518_07692 Z518_07692 Z518_05664 Z518_05664 Z518_03690 Z518_03690 Z518_04554 Z518_04554 NOP7 NOP7 Z518_05040 Z518_05040 Z518_00236 Z518_00236 Z518_00678 Z518_00678 Z518_09959 Z518_09959 Z518_10020 Z518_10020 Z518_09476 Z518_09476 Z518_10843 Z518_10843 Z518_06679 Z518_06679 Z518_05156 Z518_05156 Z518_05166 Z518_05166 Z518_05317 Z518_05317 Z518_05690 Z518_05690 Z518_08849 Z518_08849 Z518_06361 Z518_06361 Z518_03807 Z518_03807 Z518_06953 Z518_06953 Z518_03993 Z518_03993 Z518_05066 Z518_05066 Z518_01897 Z518_01897 Z518_02022 Z518_02022 Z518_02433 Z518_02433 Z518_03175 Z518_03175 Z518_03200 Z518_03200 Z518_01050 Z518_01050 Z518_09930 Z518_09930 Z518_01486 Z518_01486 Z518_08371 Z518_08371 Z518_01398 Z518_01398 Z518_01468 Z518_01468 Z518_07563 Z518_07563 Z518_05172 Z518_05172 Z518_05197 Z518_05197 Z518_03808 Z518_03808 Z518_01828 Z518_01828 Z518_02163 Z518_02163 Z518_02776 Z518_02776 Z518_02921 Z518_02921 SPB1 SPB1 Z518_01266 Z518_01266 Z518_01684 Z518_01684
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Z518_11414annotation not available (339 aa)
Z518_11084annotation not available (264 aa)
Z518_10759annotation not available (871 aa)
Z518_10809annotation not available (511 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (460 aa)
Z518_09787annotation not available (693 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (248 aa)
Z518_06682RNA helicase. (634 aa)
Z518_06779annotation not available (450 aa)
Z518_07125annotation not available (608 aa)
Z518_07330annotation not available (423 aa)
Z518_05673annotation not available (206 aa)
Z518_03845Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4845 aa)
Z518_04483annotation not available (1054 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (781 aa)
Z518_02788annotation not available (657 aa)
Z518_03344Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (249 aa)
Z518_11415annotation not available (349 aa)
Z518_10285annotation not available (227 aa)
Z518_10442annotation not available (935 aa)
Z518_10673Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (576 aa)
Z518_09304annotation not available (507 aa)
Z518_08434Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (743 aa)
Z518_07692annotation not available (261 aa)
Z518_05664annotation not available (732 aa)
Z518_03690annotation not available (229 aa)
Z518_04554annotation not available (498 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (699 aa)
Z518_05040Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (238 aa)
Z518_00236annotation not available (279 aa)
Z518_00678Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (717 aa)
Z518_09959annotation not available (523 aa)
Z518_10020annotation not available (116 aa)
Z518_09476rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family. (131 aa)
Z518_10843annotation not available (335 aa)
Z518_06679annotation not available (401 aa)
Z518_05156Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (429 aa)
Z518_05166annotation not available (1032 aa)
Z518_0531760S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (516 aa)
Z518_05690annotation not available (532 aa)
Z518_08849annotation not available (385 aa)
Z518_06361annotation not available (385 aa)
Z518_0380760S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
Z518_06953Belongs to the DEAD box helicase family. (609 aa)
Z518_03993Belongs to the DEAD box helicase family. (736 aa)
Z518_05066annotation not available (526 aa)
Z518_01897annotation not available (527 aa)
Z518_02022annotation not available (763 aa)
Z518_02433annotation not available (715 aa)
Z518_03175annotation not available (764 aa)
Z518_03200ATP-dependent RNA helicase DBP10. (932 aa)
Z518_01050annotation not available (663 aa)
Z518_09930RNA helicase. (649 aa)
Z518_01486annotation not available (330 aa)
Z518_08371Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
Z518_01398annotation not available (457 aa)
Z518_01468Protein MAK16; Belongs to the MAK16 family. (329 aa)
Z518_07563annotation not available (518 aa)
Z518_05172annotation not available (553 aa)
Z518_05197Belongs to the DEAD box helicase family. (801 aa)
Z518_03808Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (685 aa)
Z518_01828annotation not available (536 aa)
Z518_02163Belongs to the DEAD box helicase family. (796 aa)
Z518_02776annotation not available (639 aa)
Z518_02921annotation not available (368 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (825 aa)
Z518_01266annotation not available (436 aa)
Z518_01684annotation not available (200 aa)
Your Current Organism:
Rhinocladiella mackenziei
NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93
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