54 items (Rhinocladiella mackenziei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_04894	annotation not available (591 aa)
	Z518_05040	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (238 aa)
	Z518_02281	annotation not available (821 aa)
	Z518_03074	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (208 aa)
	Z518_03164	annotation not available (240 aa)
	Z518_00216	annotation not available (369 aa)
	Z518_00236	annotation not available (279 aa)
	Z518_01455	annotation not available (500 aa)
	Z518_10856	annotation not available (183 aa)
	Z518_10510	annotation not available (273 aa)
	Z518_06771	annotation not available (643 aa)
	Z518_10052	annotation not available (352 aa)
	Z518_07602	annotation not available (360 aa)
	Z518_07895	annotation not available (298 aa)
	Z518_05825	annotation not available (245 aa)
	Z518_05351	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (88 aa)
	Z518_02022	annotation not available (763 aa)
	Z518_02965	annotation not available (283 aa)
	Z518_03165	annotation not available (302 aa)
	Z518_02982	annotation not available (1184 aa)
	Z518_03227	annotation not available (1792 aa)
	Z518_09577	annotation not available (970 aa)
	Z518_03378	annotation not available (205 aa)
	Z518_08179	annotation not available (405 aa)
	Z518_01468	Protein MAK16; Belongs to the MAK16 family. (329 aa)
	Z518_07338	annotation not available (291 aa)
	Z518_05555	annotation not available (596 aa)
	Z518_01828	annotation not available (536 aa)
	Z518_02851	annotation not available (258 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (825 aa)
	Z518_00550	annotation not available (1081 aa)
	Z518_00751	annotation not available (888 aa)
	Z518_01266	annotation not available (436 aa)
	Z518_08729	annotation not available (522 aa)
	Z518_07650	annotation not available (903 aa)
	Z518_05487	annotation not available (1074 aa)
	Z518_06294	annotation not available (271 aa)
	Z518_06409	annotation not available (293 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (781 aa)
	Z518_05054	annotation not available (238 aa)
	Z518_00180	annotation not available (414 aa)
	Z518_01459	annotation not available (225 aa)
	Z518_11415	annotation not available (349 aa)
	Z518_10265	Belongs to the RNR ribonuclease family. (1005 aa)
	Z518_08142	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (340 aa)
	Z518_07692	annotation not available (261 aa)
	Z518_05553	annotation not available (451 aa)
	Z518_06115	annotation not available (560 aa)
	Z518_10759	annotation not available (871 aa)
	Z518_11414	annotation not available (339 aa)
	Z518_10481	annotation not available (261 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (460 aa)
	Z518_09303	annotation not available (728 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (699 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	NOP7	A0A0D2FWG9	A0A0D2H8C3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	SPB1	A0A0D2FWG9	A0A0D2JHC9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.995
ERB1	YTM1	A0A0D2FWG9	A0A0D2FEB3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	Z518_00236	A0A0D2FWG9	A0A0D2HES8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.856
ERB1	Z518_00751	A0A0D2FWG9	A0A0D2JJP2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.901
ERB1	Z518_01266	A0A0D2FWG9	A0A0D2JL43	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.968
ERB1	Z518_01468	A0A0D2FWG9	A0A0D2J3U0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Protein MAK16; Belongs to the MAK16 family.	0.966
ERB1	Z518_02022	A0A0D2FWG9	A0A0D2INH0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.901
ERB1	Z518_02982	A0A0D2FWG9	A0A0D2IY42	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.806
ERB1	Z518_03164	A0A0D2FWG9	A0A0D2HDF0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.782
ERB1	Z518_03165	A0A0D2FWG9	A0A0D2IRE2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.779
ERB1	Z518_03227	A0A0D2FWG9	A0A0D2IYX3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.927
ERB1	Z518_04894	A0A0D2FWG9	A0A0D2H8W9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.735
ERB1	Z518_05040	A0A0D2FWG9	A0A0D2H9A9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.769
ERB1	Z518_05487	A0A0D2FWG9	A0A0D2FQZ8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.853
ERB1	Z518_05555	A0A0D2FWG9	A0A0D2J6L2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.565
ERB1	Z518_06115	A0A0D2FWG9	A0A0D2H4A3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.914
ERB1	Z518_06409	A0A0D2FWG9	A0A0D2FTY0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.831
ERB1	Z518_06771	A0A0D2FWG9	A0A0D2IBM4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.987
ERB1	Z518_07650	A0A0D2FWG9	A0A0D2FPI7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.885