48 items (Rhinocladiella mackenziei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_10481	annotation not available (261 aa)
	Z518_09657	annotation not available (533 aa)
	Z518_08729	annotation not available (522 aa)
	Z518_07650	annotation not available (903 aa)
	Z518_06174	annotation not available (345 aa)
	Z518_06409	annotation not available (293 aa)
	Z518_04358	annotation not available (1180 aa)
	Z518_04898	annotation not available (976 aa)
	Z518_05054	annotation not available (238 aa)
	Z518_01459	annotation not available (225 aa)
	Z518_01625	annotation not available (277 aa)
	Z518_09389	Belongs to the universal ribosomal protein uS15 family. (151 aa)
	Z518_08142	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (340 aa)
	Z518_06508	annotation not available (602 aa)
	Z518_06930	Belongs to the DEAD box helicase family. (474 aa)
	Z518_06985	annotation not available (443 aa)
	Z518_05135	annotation not available (900 aa)
	Z518_05553	annotation not available (451 aa)
	Z518_06115	annotation not available (560 aa)
	Z518_04894	annotation not available (591 aa)
	Z518_05040	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (238 aa)
	Z518_08757	Belongs to the universal ribosomal protein uS11 family. (151 aa)
	Z518_10510	annotation not available (273 aa)
	Z518_06771	annotation not available (643 aa)
	Z518_07227	annotation not available (553 aa)
	Z518_08759	Belongs to the universal ribosomal protein uS9 family. (143 aa)
	Z518_06181	annotation not available (810 aa)
	Z518_03958	annotation not available (948 aa)
	Z518_07384	annotation not available (727 aa)
	Z518_07474	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (384 aa)
	Z518_07549	annotation not available (215 aa)
	Z518_04795	annotation not available (391 aa)
	Z518_05351	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (88 aa)
	Z518_05461	annotation not available (257 aa)
	Z518_02022	annotation not available (763 aa)
	Z518_06178	annotation not available (1105 aa)
	Z518_03085	annotation not available (386 aa)
	Z518_10702	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	Z518_00965	annotation not available (1226 aa)
	Z518_04982	annotation not available (995 aa)
	Z518_03227	annotation not available (1792 aa)
	Z518_09577	annotation not available (970 aa)
	Z518_08179	annotation not available (405 aa)
	Z518_06967	annotation not available (394 aa)
	Z518_05555	annotation not available (596 aa)
	Z518_06417	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (202 aa)
	Z518_00751	annotation not available (888 aa)
	Z518_01447	Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (193 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z518_00751	Z518_00965	A0A0D2JJP2	A0A0D2IUW8	annotation not available	annotation not available	0.993
Z518_00751	Z518_01447	A0A0D2JJP2	A0A0D2JLM2	annotation not available	Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation.	0.410
Z518_00751	Z518_01459	A0A0D2JJP2	A0A0D2G611	annotation not available	annotation not available	0.969
Z518_00751	Z518_01625	A0A0D2JJP2	A0A0D2G6G5	annotation not available	annotation not available	0.930
Z518_00751	Z518_02022	A0A0D2JJP2	A0A0D2INH0	annotation not available	annotation not available	0.962
Z518_00751	Z518_03085	A0A0D2JJP2	A0A0D2IR31	annotation not available	annotation not available	0.652
Z518_00751	Z518_03227	A0A0D2JJP2	A0A0D2IYX3	annotation not available	annotation not available	0.998
Z518_00751	Z518_03958	A0A0D2JJP2	A0A0D2IJW3	annotation not available	annotation not available	0.810
Z518_00751	Z518_04358	A0A0D2JJP2	A0A0D2FW46	annotation not available	annotation not available	0.998
Z518_00751	Z518_04795	A0A0D2JJP2	A0A0D2IM32	annotation not available	annotation not available	0.999
Z518_00751	Z518_04894	A0A0D2JJP2	A0A0D2H8W9	annotation not available	annotation not available	0.998
Z518_00751	Z518_04898	A0A0D2JJP2	A0A0D2FX61	annotation not available	annotation not available	0.999
Z518_00751	Z518_04982	A0A0D2JJP2	A0A0D2IV44	annotation not available	annotation not available	0.999
Z518_00751	Z518_05040	A0A0D2JJP2	A0A0D2H9A9	annotation not available	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.817
Z518_00751	Z518_05054	A0A0D2JJP2	A0A0D2FXR3	annotation not available	annotation not available	0.978
Z518_00751	Z518_05135	A0A0D2JJP2	A0A0D2H1D6	annotation not available	annotation not available	0.710
Z518_00751	Z518_05461	A0A0D2JJP2	A0A0D2IN89	annotation not available	annotation not available	0.852
Z518_00751	Z518_05555	A0A0D2JJP2	A0A0D2J6L2	annotation not available	annotation not available	0.646
Z518_00751	Z518_06115	A0A0D2JJP2	A0A0D2H4A3	annotation not available	annotation not available	0.997
Z518_00751	Z518_06174	A0A0D2JJP2	A0A0D2FT65	annotation not available	annotation not available	0.944