15 items (Rhinocladiella mackenziei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_10481	annotation not available (261 aa)
	Z518_07650	annotation not available (903 aa)
	Z518_06409	annotation not available (293 aa)
	Z518_04358	annotation not available (1180 aa)
	Z518_04898	annotation not available (976 aa)
	Z518_05054	annotation not available (238 aa)
	Z518_01459	annotation not available (225 aa)
	Z518_06115	annotation not available (560 aa)
	Z518_04894	annotation not available (591 aa)
	Z518_06771	annotation not available (643 aa)
	Z518_02022	annotation not available (763 aa)
	Z518_03227	annotation not available (1792 aa)
	Z518_09577	annotation not available (970 aa)
	Z518_08179	annotation not available (405 aa)
	Z518_00751	annotation not available (888 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z518_00751	Z518_01459	A0A0D2JJP2	A0A0D2G611	annotation not available	annotation not available	0.969
Z518_00751	Z518_02022	A0A0D2JJP2	A0A0D2INH0	annotation not available	annotation not available	0.962
Z518_00751	Z518_03227	A0A0D2JJP2	A0A0D2IYX3	annotation not available	annotation not available	0.998
Z518_00751	Z518_04358	A0A0D2JJP2	A0A0D2FW46	annotation not available	annotation not available	0.998
Z518_00751	Z518_04894	A0A0D2JJP2	A0A0D2H8W9	annotation not available	annotation not available	0.998
Z518_00751	Z518_04898	A0A0D2JJP2	A0A0D2FX61	annotation not available	annotation not available	0.999
Z518_00751	Z518_05054	A0A0D2JJP2	A0A0D2FXR3	annotation not available	annotation not available	0.978
Z518_00751	Z518_06115	A0A0D2JJP2	A0A0D2H4A3	annotation not available	annotation not available	0.997
Z518_00751	Z518_06409	A0A0D2JJP2	A0A0D2FTY0	annotation not available	annotation not available	0.997
Z518_00751	Z518_06771	A0A0D2JJP2	A0A0D2IBM4	annotation not available	annotation not available	0.996
Z518_00751	Z518_07650	A0A0D2JJP2	A0A0D2FPI7	annotation not available	annotation not available	0.984
Z518_00751	Z518_08179	A0A0D2JJP2	A0A0D2J024	annotation not available	annotation not available	0.996
Z518_00751	Z518_09577	A0A0D2JJP2	A0A0D2IYZ1	annotation not available	annotation not available	0.999
Z518_00751	Z518_10481	A0A0D2JJP2	A0A0D2FE34	annotation not available	annotation not available	0.993
Z518_01459	Z518_00751	A0A0D2G611	A0A0D2JJP2	annotation not available	annotation not available	0.969
Z518_01459	Z518_02022	A0A0D2G611	A0A0D2INH0	annotation not available	annotation not available	0.604
Z518_01459	Z518_03227	A0A0D2G611	A0A0D2IYX3	annotation not available	annotation not available	0.928
Z518_01459	Z518_04358	A0A0D2G611	A0A0D2FW46	annotation not available	annotation not available	0.990
Z518_01459	Z518_04894	A0A0D2G611	A0A0D2H8W9	annotation not available	annotation not available	0.958
Z518_01459	Z518_04898	A0A0D2G611	A0A0D2FX61	annotation not available	annotation not available	0.946