STRINGSTRING
Z518_02881 Z518_02881 Z518_02851 Z518_02851 Z518_02705 Z518_02705 Z518_05872 Z518_05872 Z518_05530 Z518_05530 Z518_05293 Z518_05293 Z518_05182 Z518_05182 Z518_07513 Z518_07513 Z518_06742 Z518_06742 Z518_00952 Z518_00952 Z518_00872 Z518_00872 Z518_06490 Z518_06490 Z518_00606 Z518_00606 Z518_00260 Z518_00260 Z518_00039 Z518_00039 Z518_09321 Z518_09321 Z518_09191 Z518_09191 Z518_09865 Z518_09865 Z518_01205 Z518_01205 Z518_09825 Z518_09825 Z518_01145 Z518_01145 Z518_09417 Z518_09417 Z518_09337 Z518_09337 Z518_07738 Z518_07738 Z518_09046 Z518_09046 Z518_07072 Z518_07072 Z518_10371 Z518_10371 Z518_09007 Z518_09007 Z518_09047 Z518_09047 Z518_09328 Z518_09328 Z518_08328 Z518_08328 Z518_08719 Z518_08719 Z518_06693 Z518_06693 Z518_06984 Z518_06984 Z518_07065 Z518_07065 Z518_07155 Z518_07155 Z518_05149 Z518_05149 Z518_03744 Z518_03744 Z518_04031 Z518_04031 Z518_04498 Z518_04498 Z518_04788 Z518_04788 Z518_02526 Z518_02526 Z518_00015 Z518_00015 Z518_00085 Z518_00085 Z518_00180 Z518_00180 Z518_09918 Z518_09918 Z518_00411 Z518_00411 Z518_00718 Z518_00718 Z518_00993 Z518_00993 Z518_01429 Z518_01429 Z518_01454 Z518_01454 Z518_11256 Z518_11256 Z518_10666 Z518_10666 Z518_08138 Z518_08138 Z518_10130 Z518_10130 Z518_09874 Z518_09874 Z518_09759 Z518_09759 Z518_09689 Z518_09689 Z518_09684 Z518_09684 Z518_10911 Z518_10911 Z518_03269 Z518_03269 Z518_02547 Z518_02547 Z518_01846 Z518_01846 Z518_04709 Z518_04709 Z518_04273 Z518_04273 Z518_05835 Z518_05835 Z518_05206 Z518_05206 Z518_07656 Z518_07656 Z518_07101 Z518_07101 Z518_07031 Z518_07031 Z518_06724 Z518_06724 Z518_08187 Z518_08187 Z518_09154 Z518_09154 Z518_09008 Z518_09008 Z518_01025 Z518_01025 Z518_00900 Z518_00900 Z518_00850 Z518_00850 Z518_04797 Z518_04797 Z518_00529 Z518_00529 Z518_03015 Z518_03015 Z518_02699 Z518_02699 Z518_02563 Z518_02563 Z518_02092 Z518_02092 Z518_04505 Z518_04505 Z518_06858 Z518_06858 Z518_06743 Z518_06743 Z518_08407 Z518_08407 Z518_08210 Z518_08210 Z518_08005 Z518_08005 Z518_05292 Z518_05292 Z518_09508 Z518_09508 Z518_07818 Z518_07818
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Z518_02881annotation not available (775 aa)
Z518_02851annotation not available (258 aa)
Z518_02705DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1260 aa)
Z518_05872annotation not available (379 aa)
Z518_05530annotation not available (521 aa)
Z518_05293annotation not available (345 aa)
Z518_05182annotation not available (336 aa)
Z518_07513annotation not available (119 aa)
Z518_06742annotation not available (226 aa)
Z518_00952annotation not available (2181 aa)
Z518_00872annotation not available (1012 aa)
Z518_06490annotation not available (264 aa)
Z518_00606annotation not available (2312 aa)
Z518_00260annotation not available (754 aa)
Z518_00039annotation not available (779 aa)
Z518_09321annotation not available (152 aa)
Z518_09191annotation not available (628 aa)
Z518_09865annotation not available (466 aa)
Z518_01205annotation not available (214 aa)
Z518_09825annotation not available (874 aa)
Z518_01145annotation not available (287 aa)
Z518_09417annotation not available (152 aa)
Z518_09337annotation not available (818 aa)
Z518_07738Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (713 aa)
Z518_09046annotation not available (377 aa)
Z518_07072annotation not available (365 aa)
Z518_10371Belongs to the protein kinase superfamily. (420 aa)
Z518_09007annotation not available (662 aa)
Z518_09047annotation not available (315 aa)
Z518_09328annotation not available (169 aa)
Z518_08328annotation not available (536 aa)
Z518_08719annotation not available (160 aa)
Z518_06693annotation not available (515 aa)
Z518_06984annotation not available (569 aa)
Z518_07065annotation not available (299 aa)
Z518_07155annotation not available (1108 aa)
Z518_05149annotation not available (187 aa)
Z518_03744annotation not available (465 aa)
Z518_04031annotation not available (967 aa)
Z518_04498annotation not available (494 aa)
Z518_04788Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1423 aa)
Z518_02526annotation not available (376 aa)
Z518_00015General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (463 aa)
Z518_00085annotation not available (763 aa)
Z518_00180annotation not available (414 aa)
Z518_09918Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (692 aa)
Z518_00411annotation not available (686 aa)
Z518_00718annotation not available (450 aa)
Z518_00993annotation not available (1238 aa)
Z518_01429Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (122 aa)
Z518_01454annotation not available (674 aa)
Z518_11256annotation not available (642 aa)
Z518_10666annotation not available (265 aa)
Z518_08138annotation not available (560 aa)
Z518_10130annotation not available (417 aa)
Z518_09874annotation not available (313 aa)
Z518_09759annotation not available (323 aa)
Z518_09689annotation not available (78 aa)
Z518_09684annotation not available (1087 aa)
Z518_10911Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (238 aa)
Z518_03269annotation not available (719 aa)
Z518_02547annotation not available (864 aa)
Z518_01846annotation not available (608 aa)
Z518_04709annotation not available (713 aa)
Z518_04273annotation not available (849 aa)
Z518_05835annotation not available (684 aa)
Z518_05206DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
Z518_07656annotation not available (632 aa)
Z518_07101annotation not available (807 aa)
Z518_07031annotation not available (238 aa)
Z518_06724annotation not available (275 aa)
Z518_08187annotation not available (1252 aa)
Z518_09154annotation not available (305 aa)
Z518_09008annotation not available (230 aa)
Z518_01025annotation not available (1657 aa)
Z518_00900annotation not available (848 aa)
Z518_00850annotation not available (354 aa)
Z518_04797annotation not available (820 aa)
Z518_00529Belongs to the cyclin family. (383 aa)
Z518_03015annotation not available (413 aa)
Z518_02699DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1760 aa)
Z518_02563annotation not available (337 aa)
Z518_02092annotation not available (92 aa)
Z518_04505annotation not available (670 aa)
Z518_06858annotation not available (623 aa)
Z518_06743annotation not available (369 aa)
Z518_08407annotation not available (732 aa)
Z518_08210annotation not available (443 aa)
Z518_08005annotation not available (231 aa)
Z518_05292Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
Z518_09508annotation not available (342 aa)
Z518_07818annotation not available (77 aa)
Your Current Organism:
Rhinocladiella mackenziei
NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93
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