13 items (Rhinocladiella mackenziei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_00411	annotation not available (686 aa)
	Z518_00180	annotation not available (414 aa)
	Z518_07065	annotation not available (299 aa)
	Z518_02881	annotation not available (775 aa)
	Z518_00952	annotation not available (2181 aa)
	Z518_00260	annotation not available (754 aa)
	Z518_02851	annotation not available (258 aa)
	Z518_00039	annotation not available (779 aa)
	Z518_04797	annotation not available (820 aa)
	Z518_08407	annotation not available (732 aa)
	Z518_09684	annotation not available (1087 aa)
	Z518_02547	annotation not available (864 aa)
	Z518_11256	annotation not available (642 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z518_00039	Z518_00411	A0A0D2IZZ8	A0A0D2G3W8	annotation not available	annotation not available	0.834
Z518_00039	Z518_07065	A0A0D2IZZ8	A0A0D2FNB4	annotation not available	annotation not available	0.472
Z518_00180	Z518_02851	A0A0D2G3G3	A0A0D2JFV2	annotation not available	annotation not available	0.509
Z518_00260	Z518_00411	A0A0D2J0I7	A0A0D2G3W8	annotation not available	annotation not available	0.834
Z518_00260	Z518_07065	A0A0D2J0I7	A0A0D2FNB4	annotation not available	annotation not available	0.472
Z518_00411	Z518_00039	A0A0D2G3W8	A0A0D2IZZ8	annotation not available	annotation not available	0.834
Z518_00411	Z518_00260	A0A0D2G3W8	A0A0D2J0I7	annotation not available	annotation not available	0.834
Z518_00411	Z518_00952	A0A0D2G3W8	A0A0D2J2E5	annotation not available	annotation not available	0.958
Z518_00411	Z518_02547	A0A0D2G3W8	A0A0D2HBS4	annotation not available	annotation not available	0.436
Z518_00411	Z518_02881	A0A0D2G3W8	A0A0D2JFX4	annotation not available	annotation not available	0.834
Z518_00411	Z518_04797	A0A0D2G3W8	A0A0D2IUI5	annotation not available	annotation not available	0.958
Z518_00411	Z518_07065	A0A0D2G3W8	A0A0D2FNB4	annotation not available	annotation not available	0.422
Z518_00411	Z518_08407	A0A0D2G3W8	A0A0D2IGR5	annotation not available	annotation not available	0.834
Z518_00411	Z518_11256	A0A0D2G3W8	A0A0D2GME6	annotation not available	annotation not available	0.725
Z518_00952	Z518_00411	A0A0D2J2E5	A0A0D2G3W8	annotation not available	annotation not available	0.958
Z518_00952	Z518_02547	A0A0D2J2E5	A0A0D2HBS4	annotation not available	annotation not available	0.494
Z518_00952	Z518_04797	A0A0D2J2E5	A0A0D2IUI5	annotation not available	annotation not available	0.873
Z518_00952	Z518_07065	A0A0D2J2E5	A0A0D2FNB4	annotation not available	annotation not available	0.668
Z518_00952	Z518_11256	A0A0D2J2E5	A0A0D2GME6	annotation not available	annotation not available	0.533
Z518_02547	Z518_00411	A0A0D2HBS4	A0A0D2G3W8	annotation not available	annotation not available	0.436