(59 nodes) Acetyltransferase activity network (Rhinocladiella mackenziei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NAT10	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1104 aa)
	Z518_07921	Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. (575 aa)
	Z518_06944	annotation not available (759 aa)
	Z518_07155	annotation not available (1108 aa)
	Z518_07630	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1146 aa)
	Z518_05154	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (548 aa)
	Z518_05507	annotation not available (655 aa)
	Z518_04011	Histone acetyltransferase type B catalytic subunit; Catalytic component of the histone acetylase B (HAT-B) complex. Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair; Belongs to the HAT1 family. (492 aa)
	Z518_02190	Enhancer of polycomb-like protein. (559 aa)
	Z518_03294	annotation not available (205 aa)
	Z518_00773	Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family. (473 aa)
	Z518_01489	Glucosamine 6-phosphate N-acetyltransferase; Belongs to the acetyltransferase family. GNA1 subfamily. (281 aa)
	Z518_01598	annotation not available (272 aa)
	Z518_00575	annotation not available (405 aa)
	Z518_01326	annotation not available (650 aa)
	Z518_00033	annotation not available (839 aa)
	Z518_10653	annotation not available (235 aa)
	Z518_05062	annotation not available (401 aa)
	Z518_04671	annotation not available (225 aa)
	Z518_04656	annotation not available (378 aa)
	Z518_01277	annotation not available (530 aa)
	Z518_00917	annotation not available (211 aa)
	Z518_00636	annotation not available (549 aa)
	Z518_02892	annotation not available (229 aa)
	Z518_02691	annotation not available (511 aa)
	Z518_01426	annotation not available (441 aa)
	Z518_10830	annotation not available (784 aa)
	Z518_04762	annotation not available (637 aa)
	Z518_00609	annotation not available (541 aa)
	Z518_10257	annotation not available (703 aa)
	Z518_11112	annotation not available (170 aa)
	Z518_11342	Histone acetyltransferase. (512 aa)
	Z518_06038	annotation not available (785 aa)
	Z518_05426	annotation not available (379 aa)
	Z518_05051	annotation not available (156 aa)
	Z518_04885	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (434 aa)
	Z518_04760	annotation not available (223 aa)
	Z518_07634	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (499 aa)
	Z518_07229	annotation not available (223 aa)
	Z518_06943	annotation not available (568 aa)
	Z518_03726	annotation not available (248 aa)
	Z518_08844	annotation not available (189 aa)
	Z518_05750	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (478 aa)
	Z518_06766	Belongs to the thiolase-like superfamily. Thiolase family. (437 aa)
	Z518_08465	annotation not available (180 aa)
	Z518_08415	Amino-acid acetyltransferase, mitochondrial; N-acetylglutamate synthase involved in arginine biosynthesis. Belongs to the acetyltransferase family. (674 aa)
	Z518_11413	annotation not available (732 aa)
	Z518_09225	annotation not available (508 aa)
	Z518_09200	Belongs to the thiolase-like superfamily. Thiolase family. (413 aa)
	Z518_10140	annotation not available (514 aa)
	Z518_09854	annotation not available (542 aa)
	Z518_10488	annotation not available (234 aa)
	Z518_00558	annotation not available (288 aa)
	Z518_02477	annotation not available (416 aa)
	Z518_06035	annotation not available (380 aa)
	Z518_07146	annotation not available (81 aa)
	Z518_08429	annotation not available (178 aa)
	Z518_08167	annotation not available (341 aa)
	Z518_08102	Belongs to the carnitine/choline acetyltransferase family. (615 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NAT10	Z518_01326	A0A0D2GST0	A0A0D2JLA9	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	annotation not available	0.615
NAT10	Z518_02477	A0A0D2GST0	A0A0D2HBL3	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	annotation not available	0.527
NAT10	Z518_07921	A0A0D2GST0	A0A0D2FJ43	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.	0.416
NAT10	Z518_10140	A0A0D2GST0	A0A0D2I5L3	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	annotation not available	0.615
Z518_00033	Z518_06766	A0A0D2JHZ0	A0A0D2IBL8	annotation not available	Belongs to the thiolase-like superfamily. Thiolase family.	0.407
Z518_00033	Z518_06943	A0A0D2JHZ0	A0A0D2IJG4	annotation not available	annotation not available	0.407
Z518_00033	Z518_06944	A0A0D2JHZ0	A0A0D2FMV5	annotation not available	annotation not available	0.407
Z518_00033	Z518_08102	A0A0D2JHZ0	A0A0D2GV51	annotation not available	Belongs to the carnitine/choline acetyltransferase family.	0.895
Z518_00033	Z518_09200	A0A0D2JHZ0	A0A0D2I6Q0	annotation not available	Belongs to the thiolase-like superfamily. Thiolase family.	0.407
Z518_00558	Z518_00575	A0A0D2HFP2	A0A0D2JJB8	annotation not available	annotation not available	0.512
Z518_00558	Z518_02477	A0A0D2HFP2	A0A0D2HBL3	annotation not available	annotation not available	0.533
Z518_00558	Z518_04671	A0A0D2HFP2	A0A0D2JC74	annotation not available	annotation not available	0.516
Z518_00558	Z518_04760	A0A0D2HFP2	A0A0D2ILZ0	annotation not available	annotation not available	0.577
Z518_00558	Z518_05507	A0A0D2HFP2	A0A0D2FR17	annotation not available	annotation not available	0.498
Z518_00558	Z518_06035	A0A0D2HFP2	A0A0D2H426	annotation not available	annotation not available	0.512
Z518_00558	Z518_08844	A0A0D2HFP2	A0A0D2IHY7	annotation not available	annotation not available	0.518
Z518_00558	Z518_10653	A0A0D2HFP2	A0A0D2GQH1	annotation not available	annotation not available	0.990
Z518_00558	Z518_11413	A0A0D2HFP2	A0A0D2I859	annotation not available	annotation not available	0.441
Z518_00575	Z518_00558	A0A0D2JJB8	A0A0D2HFP2	annotation not available	annotation not available	0.512
Z518_00575	Z518_00636	A0A0D2JJB8	A0A0D2J1L2	annotation not available	annotation not available	0.710