41 items (Rhinocladiella mackenziei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_00751	annotation not available (888 aa)
	Z518_04898	annotation not available (976 aa)
	Z518_11215	annotation not available (296 aa)
	Z518_09657	annotation not available (533 aa)
	Z518_07650	annotation not available (903 aa)
	Z518_05270	RNA helicase. (836 aa)
	Z518_06409	annotation not available (293 aa)
	Z518_05054	annotation not available (238 aa)
	Z518_01810	U3 small nucleolar RNA-associated protein 22. (1149 aa)
	Z518_02025	annotation not available (635 aa)
	Z518_02401	annotation not available (974 aa)
	Z518_10402	Belongs to the universal ribosomal protein uS5 family. (261 aa)
	Z518_08142	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (340 aa)
	Z518_06508	annotation not available (602 aa)
	Z518_06930	Belongs to the DEAD box helicase family. (474 aa)
	Z518_06985	annotation not available (443 aa)
	Z518_06115	annotation not available (560 aa)
	Z518_04894	annotation not available (591 aa)
	Z518_09874	annotation not available (313 aa)
	Z518_10843	annotation not available (335 aa)
	Z518_06771	annotation not available (643 aa)
	Z518_07127	annotation not available (613 aa)
	Z518_09503	annotation not available (902 aa)
	Z518_08150	annotation not available (514 aa)
	Z518_07384	annotation not available (727 aa)
	Z518_04435	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
	Z518_04795	annotation not available (391 aa)
	Z518_05546	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (737 aa)
	Z518_02022	annotation not available (763 aa)
	Z518_10702	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	Z518_00965	annotation not available (1226 aa)
	Z518_04982	annotation not available (995 aa)
	Z518_09975	annotation not available (575 aa)
	Z518_02767	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (455 aa)
	Z518_09080	annotation not available (188 aa)
	Z518_03227	annotation not available (1792 aa)
	Z518_09577	annotation not available (970 aa)
	Z518_08773	annotation not available (1017 aa)
	Z518_06485	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (280 aa)
	Z518_06967	annotation not available (394 aa)
	Z518_07223	annotation not available (2585 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z518_00751	Z518_00965	A0A0D2JJP2	A0A0D2IUW8	annotation not available	annotation not available	0.993
Z518_00751	Z518_01810	A0A0D2JJP2	A0A0D2FXY5	annotation not available	U3 small nucleolar RNA-associated protein 22.	0.999
Z518_00751	Z518_02022	A0A0D2JJP2	A0A0D2INH0	annotation not available	annotation not available	0.962
Z518_00751	Z518_02025	A0A0D2JJP2	A0A0D2FYH8	annotation not available	annotation not available	0.995
Z518_00751	Z518_02401	A0A0D2JJP2	A0A0D2FZL3	annotation not available	annotation not available	0.999
Z518_00751	Z518_03227	A0A0D2JJP2	A0A0D2IYX3	annotation not available	annotation not available	0.998
Z518_00751	Z518_04435	A0A0D2JJP2	A0A0D2IL82	annotation not available	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.978
Z518_00751	Z518_04795	A0A0D2JJP2	A0A0D2IM32	annotation not available	annotation not available	0.999
Z518_00751	Z518_04894	A0A0D2JJP2	A0A0D2H8W9	annotation not available	annotation not available	0.998
Z518_00751	Z518_04898	A0A0D2JJP2	A0A0D2FX61	annotation not available	annotation not available	0.999
Z518_00751	Z518_04982	A0A0D2JJP2	A0A0D2IV44	annotation not available	annotation not available	0.999
Z518_00751	Z518_05054	A0A0D2JJP2	A0A0D2FXR3	annotation not available	annotation not available	0.978
Z518_00751	Z518_05270	A0A0D2JJP2	A0A0D2FQC8	annotation not available	RNA helicase.	0.880
Z518_00751	Z518_05546	A0A0D2JJP2	A0A0D2ING4	annotation not available	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.996
Z518_00751	Z518_06115	A0A0D2JJP2	A0A0D2H4A3	annotation not available	annotation not available	0.997
Z518_00751	Z518_06409	A0A0D2JJP2	A0A0D2FTY0	annotation not available	annotation not available	0.997
Z518_00751	Z518_06485	A0A0D2JJP2	A0A0D2J214	annotation not available	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.988
Z518_00751	Z518_06508	A0A0D2JJP2	A0A0D2GXR4	annotation not available	annotation not available	0.995
Z518_00751	Z518_06771	A0A0D2JJP2	A0A0D2IBM4	annotation not available	annotation not available	0.996
Z518_00751	Z518_06930	A0A0D2JJP2	A0A0D2GYX8	annotation not available	Belongs to the DEAD box helicase family.	0.784