STRINGSTRING
Z518_09742 Z518_09742 Z518_07335 Z518_07335 Z518_07535 Z518_07535 Z518_04066 Z518_04066 Z518_04788 Z518_04788 Z518_04858 Z518_04858 Z518_10613 Z518_10613 Z518_06915 Z518_06915 Z518_07156 Z518_07156 Z518_01344 Z518_01344 Z518_01571 Z518_01571 Z518_11036 Z518_11036 Z518_10147 Z518_10147 Z518_07587 Z518_07587 Z518_05916 Z518_05916 Z518_03801 Z518_03801 Z518_04335 Z518_04335 Z518_02152 Z518_02152 Z518_11268 Z518_11268 Z518_00328 Z518_00328 Z518_00755 Z518_00755 Z518_01025 Z518_01025 Z518_01451 Z518_01451 Z518_09241 Z518_09241 Z518_03037 Z518_03037 Z518_09527 Z518_09527 Z518_07458 Z518_07458 Z518_00831 Z518_00831
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Z518_09742annotation not available (1431 aa)
Z518_07335annotation not available (592 aa)
Z518_07535FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (586 aa)
Z518_04066Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (122 aa)
Z518_04788Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1423 aa)
Z518_04858Belongs to the actin family. (484 aa)
Z518_10613annotation not available (729 aa)
Z518_06915Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (111 aa)
Z518_07156Peptidylprolyl isomerase. (526 aa)
Z518_01344Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. (287 aa)
Z518_01571annotation not available (621 aa)
Z518_11036annotation not available (1508 aa)
Z518_10147Histone H2B; Belongs to the histone H2B family. (141 aa)
Z518_07587annotation not available (473 aa)
Z518_05916annotation not available (830 aa)
Z518_03801annotation not available (245 aa)
Z518_04335RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (457 aa)
Z518_02152annotation not available (1612 aa)
Z518_11268annotation not available (69 aa)
Z518_00328Belongs to the nucleosome assembly protein (NAP) family. (324 aa)
Z518_00755annotation not available (607 aa)
Z518_01025annotation not available (1657 aa)
Z518_01451Belongs to the nucleosome assembly protein (NAP) family. (388 aa)
Z518_09241annotation not available (279 aa)
Z518_03037Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (131 aa)
Z518_09527annotation not available (1739 aa)
Z518_07458annotation not available (504 aa)
Z518_00831Histone H2A; Belongs to the histone H2A family. (139 aa)
Your Current Organism:
Rhinocladiella mackenziei
NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93
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