64 items (Rhinocladiella mackenziei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_01828	annotation not available (536 aa)
	Z518_05976	annotation not available (280 aa)
	Z518_08849	annotation not available (385 aa)
	Z518_06361	annotation not available (385 aa)
	Z518_05156	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (429 aa)
	Z518_05513	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
	Z518_05664	annotation not available (732 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (699 aa)
	Z518_05040	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (238 aa)
	Z518_05503	annotation not available (130 aa)
	Z518_03164	annotation not available (240 aa)
	Z518_00236	annotation not available (279 aa)
	Z518_00678	Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (717 aa)
	Z518_03807	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
	Z518_05066	annotation not available (526 aa)
	Z518_01897	annotation not available (527 aa)
	Z518_02433	annotation not available (715 aa)
	Z518_06428	annotation not available (301 aa)
	Z518_03165	annotation not available (302 aa)
	Z518_03869	annotation not available (235 aa)
	Z518_01050	annotation not available (663 aa)
	Z518_01894	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (205 aa)
	Z518_02982	annotation not available (1184 aa)
	Z518_09517	annotation not available (463 aa)
	Z518_03227	annotation not available (1792 aa)
	Z518_08371	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
	Z518_01177	annotation not available (155 aa)
	Z518_01468	Protein MAK16; Belongs to the MAK16 family. (329 aa)
	Z518_07749	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (323 aa)
	Z518_05223	annotation not available (128 aa)
	Z518_11414	annotation not available (339 aa)
	Z518_02163	Belongs to the DEAD box helicase family. (796 aa)
	Z518_02776	annotation not available (639 aa)
	Z518_02921	annotation not available (368 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (825 aa)
	Z518_01001	annotation not available (465 aa)
	Z518_01266	annotation not available (436 aa)
	Z518_01684	annotation not available (200 aa)
	Z518_08060	annotation not available (262 aa)
	Z518_09959	annotation not available (523 aa)
	Z518_05478	annotation not available (790 aa)
	Z518_07692	annotation not available (261 aa)
	Z518_08434	Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (743 aa)
	Z518_08364	annotation not available (716 aa)
	Z518_10457	annotation not available (151 aa)
	Z518_11035	annotation not available (605 aa)
	Z518_11415	annotation not available (349 aa)
	Z518_00180	annotation not available (414 aa)
	Z518_03344	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (249 aa)
	Z518_02788	annotation not available (657 aa)
	Z518_04958	annotation not available (449 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (781 aa)
	Z518_03845	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4845 aa)
	Z518_03674	annotation not available (148 aa)
	Z518_05673	annotation not available (206 aa)
	Z518_05144	annotation not available (311 aa)
	Z518_07125	annotation not available (608 aa)
	Z518_06779	annotation not available (450 aa)
	Z518_08790	annotation not available (270 aa)
	TIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (248 aa)
	Z518_10198	annotation not available (544 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (460 aa)
	Z518_10814	annotation not available (364 aa)
	Z518_10759	annotation not available (871 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	NOP7	A0A0D2FWG9	A0A0D2H8C3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	SPB1	A0A0D2FWG9	A0A0D2JHC9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.995
ERB1	TIF6	A0A0D2FWG9	A0A0D2FL99	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.	0.959
ERB1	YTM1	A0A0D2FWG9	A0A0D2FEB3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	Z518_00236	A0A0D2FWG9	A0A0D2HES8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.856
ERB1	Z518_00678	A0A0D2FWG9	A0A0D2HG34	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.994
ERB1	Z518_01001	A0A0D2FWG9	A0A0D2JKA3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.690
ERB1	Z518_01050	A0A0D2FWG9	A0A0D2IV84	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.950
ERB1	Z518_01177	A0A0D2FWG9	A0A0D2J359	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.957
ERB1	Z518_01266	A0A0D2FWG9	A0A0D2JL43	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.968
ERB1	Z518_01468	A0A0D2FWG9	A0A0D2J3U0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Protein MAK16; Belongs to the MAK16 family.	0.966
ERB1	Z518_01684	A0A0D2FWG9	A0A0D2JMC9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.941
ERB1	Z518_01894	A0A0D2FWG9	A0A0D2IVK8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.957
ERB1	Z518_01897	A0A0D2FWG9	A0A0D2IN40	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.998
ERB1	Z518_02163	A0A0D2FWG9	A0A0D2JED5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Belongs to the DEAD box helicase family.	0.968
ERB1	Z518_02433	A0A0D2FWG9	A0A0D2IPG5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.995
ERB1	Z518_02776	A0A0D2FWG9	A0A0D2JFP9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.985
ERB1	Z518_02788	A0A0D2FWG9	A0A0D2G0U3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.811
ERB1	Z518_02921	A0A0D2FWG9	A0A0D2JG07	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.994
ERB1	Z518_02982	A0A0D2FWG9	A0A0D2IY42	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.806