(29 nodes) Protein targeting to ER network (Rhinocladiella mackenziei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_01856	annotation not available (150 aa)
	Z518_10889	annotation not available (446 aa)
	Z518_02521	annotation not available (726 aa)
	Z518_00235	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (514 aa)
	Z518_00918	Signal peptidase subunit 3. (260 aa)
	Z518_01550	annotation not available (655 aa)
	Z518_07912	annotation not available (202 aa)
	Z518_07456	annotation not available (277 aa)
	Z518_05458	annotation not available (330 aa)
	Z518_01271	annotation not available (355 aa)
	Z518_04759	annotation not available (300 aa)
	Z518_03720	annotation not available (408 aa)
	Z518_00776	Belongs to the SecY/SEC61-alpha family. (476 aa)
	Z518_06107	annotation not available (217 aa)
	Z518_05410	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. (650 aa)
	Z518_05258	annotation not available (362 aa)
	Z518_07503	Belongs to the heat shock protein 70 family. (678 aa)
	Z518_01297	annotation not available (415 aa)
	Z518_09502	annotation not available (241 aa)
	Z518_02932	annotation not available (172 aa)
	Z518_09070	annotation not available (233 aa)
	Z518_01185	annotation not available (438 aa)
	Z518_10554	annotation not available (187 aa)
	Z518_06243	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (643 aa)
	Z518_02493	annotation not available (306 aa)
	Z518_02027	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (122 aa)
	Z518_05259	annotation not available (191 aa)
	Z518_10433	annotation not available (538 aa)
	Z518_00277	annotation not available (191 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z518_00235	Z518_00277	A0A0D2G3J4	A0A0D2HEV1	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	annotation not available	0.972
Z518_00235	Z518_00776	A0A0D2G3J4	A0A0D2JJQ6	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Belongs to the SecY/SEC61-alpha family.	0.973
Z518_00235	Z518_01185	A0A0D2G3J4	A0A0D2IVP1	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	annotation not available	0.504
Z518_00235	Z518_01271	A0A0D2G3J4	A0A0D2JL47	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	annotation not available	0.420
Z518_00235	Z518_01550	A0A0D2G3J4	A0A0D2G693	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	annotation not available	0.998
Z518_00235	Z518_01856	A0A0D2G3J4	A0A0D2H9N9	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	annotation not available	0.999
Z518_00235	Z518_02027	A0A0D2G3J4	A0A0D2INH5	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.761
Z518_00235	Z518_02493	A0A0D2G3J4	A0A0D2IPL8	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	annotation not available	0.999
Z518_00235	Z518_02521	A0A0D2G3J4	A0A0D2FZX4	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	annotation not available	0.449
Z518_00235	Z518_02932	A0A0D2G3J4	A0A0D2IXZ7	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	annotation not available	0.999
Z518_00235	Z518_03720	A0A0D2G3J4	A0A0D2H5R5	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	annotation not available	0.441
Z518_00235	Z518_04759	A0A0D2G3J4	A0A0D2H8J2	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	annotation not available	0.949
Z518_00235	Z518_05410	A0A0D2G3J4	A0A0D2J685	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.	0.999
Z518_00235	Z518_06243	A0A0D2G3J4	A0A0D2IQA7	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	0.999
Z518_00235	Z518_07456	A0A0D2G3J4	A0A0D2H0F6	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	annotation not available	0.973
Z518_00235	Z518_07503	A0A0D2G3J4	A0A0D2J4M5	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Belongs to the heat shock protein 70 family.	0.517
Z518_00235	Z518_09070	A0A0D2G3J4	A0A0D2IXM5	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	annotation not available	0.466
Z518_00277	Z518_00235	A0A0D2HEV1	A0A0D2G3J4	annotation not available	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.972
Z518_00277	Z518_01550	A0A0D2HEV1	A0A0D2G693	annotation not available	annotation not available	0.919
Z518_00277	Z518_01856	A0A0D2HEV1	A0A0D2H9N9	annotation not available	annotation not available	0.972