(12 nodes) Chromosome, subtelomeric region network (Rhinocladiella mackenziei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_09742	annotation not available (1431 aa)
	Z518_02690	annotation not available (362 aa)
	Z518_00690	RNA-dependent RNA polymerase. (1194 aa)
	Z518_11168	annotation not available (891 aa)
	Z518_03678	annotation not available (1713 aa)
	Z518_05853	annotation not available (542 aa)
	Z518_06837	annotation not available (917 aa)
	Z518_01342	Belongs to the argonaute family. (1024 aa)
	Z518_05224	annotation not available (292 aa)
	Z518_04455	RNA-dependent RNA polymerase. (1397 aa)
	Z518_04037	annotation not available (232 aa)
	Z518_05261	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (845 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z518_01342	Z518_04037	A0A0D2J3G1	A0A0D2H6P8	Belongs to the argonaute family.	annotation not available	0.522
Z518_01342	Z518_11168	A0A0D2J3G1	A0A0D2IRS0	Belongs to the argonaute family.	annotation not available	0.490
Z518_02690	Z518_04037	A0A0D2JFK5	A0A0D2H6P8	annotation not available	annotation not available	0.544
Z518_02690	Z518_05224	A0A0D2JFK5	A0A0D2IMI0	annotation not available	annotation not available	0.527
Z518_02690	Z518_05853	A0A0D2JFK5	A0A0D2IPA7	annotation not available	annotation not available	0.578
Z518_02690	Z518_09742	A0A0D2JFK5	A0A0D2FF82	annotation not available	annotation not available	0.622
Z518_02690	Z518_11168	A0A0D2JFK5	A0A0D2IRS0	annotation not available	annotation not available	0.498
Z518_04037	Z518_01342	A0A0D2H6P8	A0A0D2J3G1	annotation not available	Belongs to the argonaute family.	0.522
Z518_04037	Z518_02690	A0A0D2H6P8	A0A0D2JFK5	annotation not available	annotation not available	0.544
Z518_04037	Z518_05224	A0A0D2H6P8	A0A0D2IMI0	annotation not available	annotation not available	0.436
Z518_04037	Z518_05261	A0A0D2H6P8	A0A0D2H1S6	annotation not available	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	0.544
Z518_04037	Z518_06837	A0A0D2H6P8	A0A0D2J2T8	annotation not available	annotation not available	0.522
Z518_04037	Z518_09742	A0A0D2H6P8	A0A0D2FF82	annotation not available	annotation not available	0.884
Z518_05224	Z518_02690	A0A0D2IMI0	A0A0D2JFK5	annotation not available	annotation not available	0.527
Z518_05224	Z518_04037	A0A0D2IMI0	A0A0D2H6P8	annotation not available	annotation not available	0.436
Z518_05224	Z518_05261	A0A0D2IMI0	A0A0D2H1S6	annotation not available	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	0.527
Z518_05224	Z518_09742	A0A0D2IMI0	A0A0D2FF82	annotation not available	annotation not available	0.958
Z518_05261	Z518_04037	A0A0D2H1S6	A0A0D2H6P8	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	annotation not available	0.544
Z518_05261	Z518_05224	A0A0D2H1S6	A0A0D2IMI0	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	annotation not available	0.527
Z518_05261	Z518_05853	A0A0D2H1S6	A0A0D2IPA7	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	annotation not available	0.578