154 items (Rhinocladiella mackenziei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_07589	annotation not available (1268 aa)
	Z518_11384	annotation not available (839 aa)
	Z518_10809	annotation not available (511 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (460 aa)
	Z518_09657	annotation not available (533 aa)
	Z518_09862	annotation not available (353 aa)
	Z518_09102	annotation not available (703 aa)
	Z518_09348	annotation not available (521 aa)
	Z518_06949	annotation not available (1308 aa)
	Z518_07776	annotation not available (1087 aa)
	Z518_05194	annotation not available (348 aa)
	Z518_05199	annotation not available (414 aa)
	Z518_05552	annotation not available (719 aa)
	Z518_05818	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1044 aa)
	Z518_06039	annotation not available (912 aa)
	Z518_06254	annotation not available (1166 aa)
	Z518_03835	annotation not available (1093 aa)
	Z518_04418	annotation not available (274 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (781 aa)
	Z518_04853	annotation not available (1287 aa)
	Z518_04898	annotation not available (976 aa)
	Z518_04958	annotation not available (449 aa)
	Z518_02401	annotation not available (974 aa)
	Z518_02411	annotation not available (425 aa)
	Z518_02928	annotation not available (358 aa)
	Z518_02948	annotation not available (830 aa)
	Z518_03033	annotation not available (1013 aa)
	Z518_03228	annotation not available (686 aa)
	Z518_03389	annotation not available (476 aa)
	Z518_00075	annotation not available (408 aa)
	Z518_00085	annotation not available (763 aa)
	Z518_00110	annotation not available (1260 aa)
	Z518_00230	annotation not available (478 aa)
	Z518_00728	annotation not available (436 aa)
	Z518_01223	Belongs to the WD repeat SEC13 family. (296 aa)
	Z518_01258	annotation not available (569 aa)
	Z518_10695	annotation not available (1117 aa)
	Z518_10785	annotation not available (670 aa)
	PRT1	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (743 aa)
	Z518_10351	annotation not available (590 aa)
	Z518_10437	annotation not available (617 aa)
	Z518_10567	annotation not available (507 aa)
	Z518_10613	annotation not available (729 aa)
	PAC1	Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family. (457 aa)
	Z518_08107	Belongs to the WD repeat SEC13 family. (436 aa)
	Z518_06790	annotation not available (264 aa)
	Z518_06985	annotation not available (443 aa)
	Z518_07491	annotation not available (766 aa)
	Z518_05915	annotation not available (338 aa)
	Z518_06115	annotation not available (560 aa)
	Z518_03861	annotation not available (668 aa)
	Z518_04122	annotation not available (1333 aa)
	Z518_04152	annotation not available (722 aa)
	Z518_04554	annotation not available (498 aa)
	TIF34	Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (336 aa)
	Z518_04869	annotation not available (1000 aa)
	Z518_04894	annotation not available (591 aa)
	Z518_02337	annotation not available (611 aa)
	Z518_03395	annotation not available (901 aa)
	Z518_03400	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (830 aa)
	Z518_03550	annotation not available (427 aa)
	Z518_00513	annotation not available (847 aa)
	Z518_00533	annotation not available (363 aa)
	Z518_00999	annotation not available (653 aa)
	Z518_01571	annotation not available (621 aa)
	Z518_11121	annotation not available (1248 aa)
	Z518_10741	annotation not available (1263 aa)
	CIA1	Probable cytosolic iron-sulfur protein assembly protein 1; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. (570 aa)
	Z518_10926	annotation not available (512 aa)
	Z518_10588	annotation not available (1228 aa)
	Z518_09375	Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. (1506 aa)
	Z518_11179	annotation not available (773 aa)
	Z518_08203	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (477 aa)
	Z518_08213	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (842 aa)
	Z518_08495	annotation not available (625 aa)
	Z518_10943	annotation not available (1197 aa)
	Z518_09696	annotation not available (1263 aa)
	Z518_06736	annotation not available (468 aa)
	Z518_07127	annotation not available (613 aa)
	Z518_07132	annotation not available (316 aa)
	Z518_07182	annotation not available (415 aa)
	PAN2	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1178 aa)
	Z518_07437	annotation not available (690 aa)
	TRM82	tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. (871 aa)
	Z518_09558	annotation not available (1361 aa)
	Z518_08000	annotation not available (412 aa)
	Z518_08080	annotation not available (678 aa)
	Z518_05690	annotation not available (532 aa)
	Z518_06321	annotation not available (473 aa)
	Z518_06401	annotation not available (955 aa)
	Z518_03581	annotation not available (1490 aa)
	Z518_03862	annotation not available (533 aa)
	Z518_04199	annotation not available (706 aa)
	Z518_04284	annotation not available (1302 aa)
	Z518_07384	annotation not available (727 aa)
	Z518_07544	annotation not available (727 aa)
	Z518_05066	annotation not available (526 aa)
	Z518_05446	annotation not available (1339 aa)
	Z518_02202	annotation not available (699 aa)
	Z518_02558	annotation not available (1439 aa)
	Z518_06178	annotation not available (1105 aa)
	Z518_02915	annotation not available (353 aa)
	Z518_11407	annotation not available (1482 aa)
	Z518_03451	annotation not available (1237 aa)
	Z518_04080	annotation not available (1491 aa)
	Z518_04206	annotation not available (1639 aa)
	Z518_10757	annotation not available (402 aa)
	Z518_10767	annotation not available (677 aa)
	Z518_00182	annotation not available (863 aa)
	Z518_00232	annotation not available (594 aa)
	Z518_10822	annotation not available (1677 aa)
	Z518_10977	E3 ubiquitin-protein ligase PEP5. (980 aa)
	Z518_00579	annotation not available (2548 aa)
	Z518_10348	annotation not available (1325 aa)
	Z518_00674	annotation not available (753 aa)
	Z518_00725	annotation not available (329 aa)
	Z518_04982	annotation not available (995 aa)
	Z518_01170	annotation not available (1620 aa)
	Z518_09895	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1187 aa)
	Z518_01340	annotation not available (582 aa)
	Z518_10000	annotation not available (748 aa)
	Z518_02335	annotation not available (361 aa)
	Z518_02405	annotation not available (1211 aa)
	Z518_09126	annotation not available (1556 aa)
	Z518_09421	annotation not available (477 aa)
	Z518_09562	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (534 aa)
	Z518_09577	annotation not available (970 aa)
	Z518_03433	annotation not available (1174 aa)
	Z518_08617	annotation not available (1179 aa)
	Z518_00586	annotation not available (639 aa)
	Z518_08743	annotation not available (1470 aa)
	Z518_08773	annotation not available (1017 aa)
	Z518_06595	annotation not available (2068 aa)
	Z518_01282	annotation not available (394 aa)
	Z518_01579	annotation not available (805 aa)
	Z518_07518	annotation not available (622 aa)
	Z518_07688	annotation not available (569 aa)
	Z518_05172	annotation not available (553 aa)
	Z518_05233	annotation not available (1691 aa)
	Z518_05460	annotation not available (1062 aa)
	Z518_03828	annotation not available (905 aa)
	Z518_04014	annotation not available (679 aa)
	Z518_05067	Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks; Belongs to the WD repeat ARPC1 family. (363 aa)
	Z518_01828	annotation not available (536 aa)
	Z518_01928	annotation not available (793 aa)
	Z518_02700	annotation not available (473 aa)
	Z518_02781	annotation not available (405 aa)
	Z518_02861	annotation not available (1387 aa)
	Z518_03096	annotation not available (441 aa)
	Z518_00565	annotation not available (804 aa)
	Z518_00570	annotation not available (1328 aa)
	Z518_00751	annotation not available (888 aa)
	Z518_00896	annotation not available (1521 aa)
	Z518_01001	annotation not available (465 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	PRT1	A0A0D2FWG9	A0A0D2GP79	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.	0.749
ERB1	YTM1	A0A0D2FWG9	A0A0D2FEB3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	Z518_00085	A0A0D2FWG9	A0A0D2G3A9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.648
ERB1	Z518_00230	A0A0D2FWG9	A0A0D2G3J0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.554
ERB1	Z518_00751	A0A0D2FWG9	A0A0D2JJP2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.901
ERB1	Z518_01001	A0A0D2FWG9	A0A0D2JKA3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.690
ERB1	Z518_01340	A0A0D2FWG9	A0A0D2IW38	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.652
ERB1	Z518_01579	A0A0D2FWG9	A0A0D2J484	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.445
ERB1	Z518_02337	A0A0D2FWG9	A0A0D2HB70	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.652
ERB1	Z518_02401	A0A0D2FWG9	A0A0D2FZL3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.825
ERB1	Z518_03395	A0A0D2FWG9	A0A0D2HDV1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.554
ERB1	Z518_03861	A0A0D2FWG9	A0A0D2H663	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.648
ERB1	Z518_04554	A0A0D2FWG9	A0A0D2H836	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.769
ERB1	Z518_04894	A0A0D2FWG9	A0A0D2H8W9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.735
ERB1	Z518_04898	A0A0D2FWG9	A0A0D2FX61	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.917
ERB1	Z518_04958	A0A0D2FWG9	A0A0D2FXE4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.574
ERB1	Z518_04982	A0A0D2FWG9	A0A0D2IV44	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.736
ERB1	Z518_05066	A0A0D2FWG9	A0A0D2IMT6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.917
ERB1	Z518_05172	A0A0D2FWG9	A0A0D2J5I2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.888
ERB1	Z518_05199	A0A0D2FWG9	A0A0D2FQ53	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	annotation not available	0.648