48 items (Rhinocladiella mackenziei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_06324	annotation not available (354 aa)
	Z518_04262	annotation not available (620 aa)
	Z518_03912	annotation not available (1457 aa)
	Z518_05458	annotation not available (330 aa)
	Z518_07787	annotation not available (558 aa)
	Z518_09459	annotation not available (645 aa)
	Z518_10407	annotation not available (312 aa)
	Z518_02873	annotation not available (339 aa)
	Z518_00758	annotation not available (914 aa)
	Z518_00993	annotation not available (1238 aa)
	Z518_01394	annotation not available (1072 aa)
	Z518_01545	annotation not available (1096 aa)
	Z518_11115	annotation not available (966 aa)
	Z518_07083	annotation not available (402 aa)
	Z518_04733	annotation not available (566 aa)
	Z518_04763	annotation not available (408 aa)
	Z518_00027	annotation not available (722 aa)
	Z518_03915	annotation not available (149 aa)
	Z518_03583	annotation not available (1100 aa)
	Z518_02830	annotation not available (879 aa)
	Z518_05371	annotation not available (877 aa)
	Z518_01852	annotation not available (370 aa)
	Z518_07780	annotation not available (1474 aa)
	Z518_06341	annotation not available (793 aa)
	Z518_06046	annotation not available (642 aa)
	Z518_10755	annotation not available (345 aa)
	Z518_08442	annotation not available (1148 aa)
	Z518_01363	annotation not available (1431 aa)
	Z518_01087	Serine/threonine-protein phosphatase. (512 aa)
	Z518_09000	annotation not available (852 aa)
	Z518_02390	annotation not available (584 aa)
	Z518_01015	annotation not available (1217 aa)
	Z518_00780	annotation not available (759 aa)
	Z518_07262	annotation not available (796 aa)
	Z518_09991	annotation not available (1414 aa)
	Z518_09686	annotation not available (621 aa)
	Z518_11008	annotation not available (159 aa)
	Z518_02327	annotation not available (762 aa)
	Z518_04994	annotation not available (1103 aa)
	Z518_04884	annotation not available (541 aa)
	Z518_11074	annotation not available (750 aa)
	Z518_09579	annotation not available (1627 aa)
	Z518_07645	annotation not available (1046 aa)
	Z518_05497	annotation not available (917 aa)
	Z518_03537	annotation not available (1124 aa)
	Z518_04791	annotation not available (1225 aa)
	Z518_06407	annotation not available (1176 aa)
	Z518_07473	annotation not available (947 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

Send network to Cytoscape

Export your current network:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z518_00027	Z518_00780	A0A0D2ISJ2	A0A0D2IUF7	annotation not available	annotation not available	0.999
Z518_00027	Z518_00993	A0A0D2ISJ2	A0A0D2G573	annotation not available	annotation not available	0.665
Z518_00027	Z518_01394	A0A0D2ISJ2	A0A0D2G5V5	annotation not available	annotation not available	0.665
Z518_00027	Z518_01545	A0A0D2ISJ2	A0A0D2G689	annotation not available	annotation not available	0.665
Z518_00027	Z518_02390	A0A0D2ISJ2	A0A0D2IWJ7	annotation not available	annotation not available	0.665
Z518_00027	Z518_03537	A0A0D2ISJ2	A0A0D2JHR8	annotation not available	annotation not available	0.665
Z518_00027	Z518_03583	A0A0D2ISJ2	A0A0D2IR23	annotation not available	annotation not available	0.665
Z518_00027	Z518_03912	A0A0D2ISJ2	A0A0D2H6C3	annotation not available	annotation not available	0.665
Z518_00027	Z518_03915	A0A0D2ISJ2	A0A0D2IS31	annotation not available	annotation not available	0.665
Z518_00027	Z518_04763	A0A0D2ISJ2	A0A0D2FWW0	annotation not available	annotation not available	0.665
Z518_00027	Z518_04791	A0A0D2ISJ2	A0A0D2JCH7	annotation not available	annotation not available	0.665
Z518_00027	Z518_04994	A0A0D2ISJ2	A0A0D2H978	annotation not available	annotation not available	0.665
Z518_00027	Z518_05458	A0A0D2ISJ2	A0A0D2H2F1	annotation not available	annotation not available	0.665
Z518_00027	Z518_05497	A0A0D2ISJ2	A0A0D2FR06	annotation not available	annotation not available	0.665
Z518_00027	Z518_06046	A0A0D2ISJ2	A0A0D2IHB5	annotation not available	annotation not available	0.665
Z518_00027	Z518_06324	A0A0D2ISJ2	A0A0D2FTP1	annotation not available	annotation not available	0.665
Z518_00027	Z518_06341	A0A0D2ISJ2	A0A0D2II99	annotation not available	annotation not available	0.668
Z518_00027	Z518_07083	A0A0D2ISJ2	A0A0D2J3L0	annotation not available	annotation not available	0.665
Z518_00027	Z518_07262	A0A0D2ISJ2	A0A0D2ICY1	annotation not available	annotation not available	0.999
Z518_00027	Z518_08442	A0A0D2ISJ2	A0A0D2IGX0	annotation not available	annotation not available	0.665