13 items (Rhinocladiella mackenziei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_11224	annotation not available (957 aa)
	Z518_05740	Belongs to the ubiquitin-conjugating enzyme family. (340 aa)
	Z518_04475	annotation not available (1406 aa)
	Z518_06058	annotation not available (767 aa)
	Z518_09335	annotation not available (305 aa)
	Z518_02769	annotation not available (289 aa)
	Z518_02337	annotation not available (611 aa)
	Z518_06780	annotation not available (158 aa)
	Z518_02486	Belongs to the ubiquitin-conjugating enzyme family. (184 aa)
	Z518_05194	annotation not available (348 aa)
	Z518_09812	annotation not available (154 aa)
	Z518_09761	annotation not available (226 aa)
	Z518_01340	annotation not available (582 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z518_01340	Z518_02486	A0A0D2IW38	A0A0D2FZT9	annotation not available	Belongs to the ubiquitin-conjugating enzyme family.	0.970
Z518_01340	Z518_02769	A0A0D2IW38	A0A0D2HCE9	annotation not available	annotation not available	0.720
Z518_01340	Z518_04475	A0A0D2IW38	A0A0D2ILD5	annotation not available	annotation not available	0.981
Z518_01340	Z518_05194	A0A0D2IW38	A0A0D2FQ48	annotation not available	annotation not available	0.971
Z518_01340	Z518_05740	A0A0D2IW38	A0A0D2IGG1	annotation not available	Belongs to the ubiquitin-conjugating enzyme family.	0.909
Z518_01340	Z518_06058	A0A0D2IW38	A0A0D2IPS7	annotation not available	annotation not available	0.968
Z518_01340	Z518_06780	A0A0D2IW38	A0A0D2GYD2	annotation not available	annotation not available	0.686
Z518_01340	Z518_09335	A0A0D2IW38	A0A0D2I713	annotation not available	annotation not available	0.822
Z518_01340	Z518_09761	A0A0D2IW38	A0A0D2IBP2	annotation not available	annotation not available	0.984
Z518_01340	Z518_09812	A0A0D2IW38	A0A0D2FFF1	annotation not available	annotation not available	0.720
Z518_01340	Z518_11224	A0A0D2IW38	A0A0D2I8D1	annotation not available	annotation not available	0.720
Z518_02337	Z518_02486	A0A0D2HB70	A0A0D2FZT9	annotation not available	Belongs to the ubiquitin-conjugating enzyme family.	0.970
Z518_02337	Z518_02769	A0A0D2HB70	A0A0D2HCE9	annotation not available	annotation not available	0.720
Z518_02337	Z518_04475	A0A0D2HB70	A0A0D2ILD5	annotation not available	annotation not available	0.981
Z518_02337	Z518_05194	A0A0D2HB70	A0A0D2FQ48	annotation not available	annotation not available	0.971
Z518_02337	Z518_05740	A0A0D2HB70	A0A0D2IGG1	annotation not available	Belongs to the ubiquitin-conjugating enzyme family.	0.909
Z518_02337	Z518_06058	A0A0D2HB70	A0A0D2IPS7	annotation not available	annotation not available	0.968
Z518_02337	Z518_06780	A0A0D2HB70	A0A0D2GYD2	annotation not available	annotation not available	0.686
Z518_02337	Z518_09335	A0A0D2HB70	A0A0D2I713	annotation not available	annotation not available	0.822
Z518_02337	Z518_09761	A0A0D2HB70	A0A0D2IBP2	annotation not available	annotation not available	0.984