STRINGSTRING
Z518_10759 Z518_10759 YTM1 YTM1 Z518_09657 Z518_09657 Z518_07956 Z518_07956 Z518_07976 Z518_07976 Z518_08729 Z518_08729 Z518_07650 Z518_07650 Z518_05144 Z518_05144 Z518_05487 Z518_05487 Z518_05813 Z518_05813 Z518_06174 Z518_06174 Z518_06294 Z518_06294 Z518_06409 Z518_06409 Z518_04358 Z518_04358 Z518_04453 Z518_04453 ERB1 ERB1 Z518_04898 Z518_04898 Z518_05054 Z518_05054 Z518_01810 Z518_01810 Z518_02025 Z518_02025 Z518_02260 Z518_02260 Z518_02401 Z518_02401 Z518_00230 Z518_00230 Z518_01193 Z518_01193 Z518_01524 Z518_01524 Z518_10285 Z518_10285 Z518_10402 Z518_10402 Z518_10593 Z518_10593 NAT10 NAT10 Z518_09389 Z518_09389 Z518_07852 Z518_07852 Z518_08077 Z518_08077 Z518_08142 Z518_08142 Z518_08264 Z518_08264 Z518_08389 Z518_08389 Z518_06508 Z518_06508 RPS0 RPS0 Z518_06835 Z518_06835 Z518_06930 Z518_06930 Z518_06985 Z518_06985 Z518_05553 Z518_05553 Z518_05664 Z518_05664 Z518_05824 Z518_05824 Z518_06115 Z518_06115 NOP7 NOP7 Z518_04894 Z518_04894 Z518_02036 Z518_02036 Z518_02131 Z518_02131 Z518_02211 Z518_02211 Z518_02281 Z518_02281 Z518_02347 Z518_02347 Z518_02854 Z518_02854 Z518_03164 Z518_03164 Z518_03395 Z518_03395 Z518_00216 Z518_00216 Z518_01566 Z518_01566 Z518_10856 Z518_10856 Z518_10926 Z518_10926 Z518_09764 Z518_09764 Z518_09984 Z518_09984 Z518_09455 Z518_09455 Z518_09506 Z518_09506 Z518_08757 Z518_08757 Z518_10510 Z518_10510 Z518_06771 Z518_06771 Z518_10006 Z518_10006 Z518_07127 Z518_07127 Z518_10052 Z518_10052 Z518_07602 Z518_07602 Z518_09503 Z518_09503 Z518_07895 Z518_07895 Z518_07915 Z518_07915 Z518_08150 Z518_08150 Z518_05690 Z518_05690 Z518_05770 Z518_05770 Z518_05825 Z518_05825 Z518_08643 Z518_08643 Z518_08759 Z518_08759 Z518_06181 Z518_06181 Z518_08869 Z518_08869 Z518_06416 Z518_06416 Z518_03807 Z518_03807 Z518_07439 Z518_07439 Z518_07474 Z518_07474 Z518_04435 Z518_04435 Z518_04485 Z518_04485 Z518_04795 Z518_04795 Z518_01897 Z518_01897 Z518_01201 Z518_01201 Z518_01146 Z518_01146 Z518_01016 Z518_01016 Z518_00931 Z518_00931 Z518_00751 Z518_00751 SPB1 SPB1 Z518_02921 Z518_02921 Z518_02851 Z518_02851 Z518_02680 Z518_02680 Z518_02384 Z518_02384 Z518_02048 Z518_02048 Z518_01828 Z518_01828 Z518_05057 Z518_05057 Z518_06417 Z518_06417 Z518_05485 Z518_05485 Z518_07338 Z518_07338 Z518_07223 Z518_07223 Z518_06967 Z518_06967 Z518_01152 Z518_01152 Z518_05406 Z518_05406 Z518_05546 Z518_05546 Z518_02047 Z518_02047 Z518_06178 Z518_06178 Z518_02775 Z518_02775 Z518_02835 Z518_02835 Z518_02965 Z518_02965 Z518_03080 Z518_03080 Z518_03085 Z518_03085 Z518_03165 Z518_03165 Z518_10702 Z518_10702 Z518_04472 Z518_04472 Z518_10302 Z518_10302 Z518_00905 Z518_00905 Z518_00965 Z518_00965 Z518_04982 Z518_04982 Z518_05033 Z518_05033 TSR3 TSR3 Z518_10061 Z518_10061 Z518_01486 Z518_01486 Z518_01688 Z518_01688 Z518_09080 Z518_09080 Z518_03227 Z518_03227 Z518_09577 Z518_09577 Z518_03378 Z518_03378 Z518_08179 Z518_08179 Z518_08431 Z518_08431 Z518_08773 Z518_08773 Z518_06485 Z518_06485 Z518_06686 Z518_06686 Z518_01618 Z518_01618 RPS1 RPS1 Z518_11215 Z518_11215 Z518_11084 Z518_11084 Z518_10481 Z518_10481
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Z518_10759annotation not available (871 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (460 aa)
Z518_09657annotation not available (533 aa)
Z518_07956annotation not available (550 aa)
Z518_0797640S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (150 aa)
Z518_08729annotation not available (522 aa)
Z518_07650annotation not available (903 aa)
Z518_05144annotation not available (311 aa)
Z518_05487annotation not available (1074 aa)
Z518_05813Belongs to the protein kinase superfamily. (372 aa)
Z518_06174annotation not available (345 aa)
Z518_06294annotation not available (271 aa)
Z518_06409annotation not available (293 aa)
Z518_04358annotation not available (1180 aa)
Z518_04453Belongs to the universal ribosomal protein uS4 family. (193 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (781 aa)
Z518_04898annotation not available (976 aa)
Z518_05054annotation not available (238 aa)
Z518_01810U3 small nucleolar RNA-associated protein 22. (1149 aa)
Z518_02025annotation not available (635 aa)
Z518_02260annotation not available (194 aa)
Z518_02401annotation not available (974 aa)
Z518_00230annotation not available (478 aa)
Z518_01193U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (743 aa)
Z518_01524annotation not available (872 aa)
Z518_10285annotation not available (227 aa)
Z518_10402Belongs to the universal ribosomal protein uS5 family. (261 aa)
Z518_10593Belongs to the universal ribosomal protein uS17 family. (162 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1104 aa)
Z518_09389Belongs to the universal ribosomal protein uS15 family. (151 aa)
Z518_07852Belongs to the DEAD box helicase family. (526 aa)
Z518_0807740S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (239 aa)
Z518_08142KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (340 aa)
Z518_08264Belongs to the protein kinase superfamily. Tyr protein kinase family. (356 aa)
Z518_08389annotation not available (150 aa)
Z518_06508annotation not available (602 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (283 aa)
Z518_06835annotation not available (483 aa)
Z518_06930Belongs to the DEAD box helicase family. (474 aa)
Z518_06985annotation not available (443 aa)
Z518_05553annotation not available (451 aa)
Z518_05664annotation not available (732 aa)
Z518_0582440S ribosomal protein S27. (345 aa)
Z518_06115annotation not available (560 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (699 aa)
Z518_04894annotation not available (591 aa)
Z518_02036annotation not available (687 aa)
Z518_02131annotation not available (439 aa)
Z518_02211annotation not available (319 aa)
Z518_02281annotation not available (821 aa)
Z518_0234740S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (134 aa)
Z518_02854annotation not available (117 aa)
Z518_03164annotation not available (240 aa)
Z518_03395annotation not available (901 aa)
Z518_00216annotation not available (369 aa)
Z518_01566annotation not available (152 aa)
Z518_10856annotation not available (183 aa)
Z518_10926annotation not available (512 aa)
Z518_09764annotation not available (628 aa)
Z518_09984annotation not available (116 aa)
Z518_09455annotation not available (501 aa)
Z518_09506Belongs to the universal ribosomal protein uS19 family. (211 aa)
Z518_08757Belongs to the universal ribosomal protein uS11 family. (151 aa)
Z518_10510annotation not available (273 aa)
Z518_06771annotation not available (643 aa)
Z518_10006annotation not available (154 aa)
Z518_07127annotation not available (613 aa)
Z518_10052annotation not available (352 aa)
Z518_07602annotation not available (360 aa)
Z518_09503annotation not available (902 aa)
Z518_07895annotation not available (298 aa)
Z518_07915Belongs to the universal ribosomal protein uS3 family. (261 aa)
Z518_08150annotation not available (514 aa)
Z518_05690annotation not available (532 aa)
Z518_05770annotation not available (239 aa)
Z518_05825annotation not available (245 aa)
Z518_08643annotation not available (346 aa)
Z518_08759Belongs to the universal ribosomal protein uS9 family. (143 aa)
Z518_06181annotation not available (810 aa)
Z518_08869annotation not available (257 aa)
Z518_06416annotation not available (207 aa)
Z518_0380760S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
Z518_07439Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (628 aa)
Z518_07474rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (384 aa)
Z518_0443540S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
Z518_04485annotation not available (597 aa)
Z518_04795annotation not available (391 aa)
Z518_01897annotation not available (527 aa)
Z518_01201annotation not available (168 aa)
Z518_01146Belongs to the universal ribosomal protein uS12 family. (146 aa)
Z518_01016annotation not available (779 aa)
Z518_0093120S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (424 aa)
Z518_00751annotation not available (888 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (825 aa)
Z518_02921annotation not available (368 aa)
Z518_02851annotation not available (258 aa)
Z518_02680annotation not available (1848 aa)
Z518_02384annotation not available (139 aa)
Z518_0204840S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (98 aa)
Z518_01828annotation not available (536 aa)
Z518_05057annotation not available (66 aa)
Z518_0641740S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (202 aa)
Z518_05485Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (301 aa)
Z518_07338annotation not available (291 aa)
Z518_07223annotation not available (2585 aa)
Z518_06967annotation not available (394 aa)
Z518_01152annotation not available (472 aa)
Z518_05406annotation not available (92 aa)
Z518_05546U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (737 aa)
Z518_02047Belongs to the universal ribosomal protein uS8 family. (130 aa)
Z518_06178annotation not available (1105 aa)
Z518_02775annotation not available (553 aa)
Z518_02835annotation not available (315 aa)
Z518_02965annotation not available (283 aa)
Z518_03080annotation not available (313 aa)
Z518_03085annotation not available (386 aa)
Z518_03165annotation not available (302 aa)
Z518_10702Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
Z518_0447240S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (264 aa)
Z518_10302annotation not available (363 aa)
Z518_00905annotation not available (1323 aa)
Z518_00965annotation not available (1226 aa)
Z518_04982annotation not available (995 aa)
Z518_0503340S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (121 aa)
TSR3Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family. (392 aa)
Z518_10061annotation not available (296 aa)
Z518_01486annotation not available (330 aa)
Z518_01688annotation not available (295 aa)
Z518_09080annotation not available (188 aa)
Z518_03227annotation not available (1792 aa)
Z518_09577annotation not available (970 aa)
Z518_03378annotation not available (205 aa)
Z518_08179annotation not available (405 aa)
Z518_08431Belongs to the universal ribosomal protein uS7 family. (215 aa)
Z518_08773annotation not available (1017 aa)
Z518_06485U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (280 aa)
Z518_066865'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1043 aa)
Z518_01618annotation not available (254 aa)
RPS140S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (257 aa)
Z518_11215annotation not available (296 aa)
Z518_11084annotation not available (264 aa)
Z518_10481annotation not available (261 aa)
Your Current Organism:
Rhinocladiella mackenziei
NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93
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