16 items (Rhinocladiella mackenziei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_08769	annotation not available (644 aa)
	Z518_02007	annotation not available (344 aa)
	Z518_05043	annotation not available (542 aa)
	Z518_08567	annotation not available (321 aa)
	Z518_06177	annotation not available (366 aa)
	Z518_05042	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (326 aa)
	Z518_02916	annotation not available (205 aa)
	Z518_00013	annotation not available (227 aa)
	Z518_08770	annotation not available (211 aa)
	Z518_02295	annotation not available (1553 aa)
	Z518_04218	annotation not available (252 aa)
	Z518_00864	annotation not available (262 aa)
	Z518_01510	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family. (510 aa)
	Z518_11167	annotation not available (211 aa)
	Z518_10913	annotation not available (174 aa)
	Z518_10621	annotation not available (338 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z518_00013	Z518_00864	A0A0D2JHX2	A0A0D2HGG8	annotation not available	annotation not available	0.673
Z518_00013	Z518_01510	A0A0D2JHX2	A0A0D2HIC8	annotation not available	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.	0.942
Z518_00013	Z518_02007	A0A0D2JHX2	A0A0D2INF3	annotation not available	annotation not available	0.623
Z518_00013	Z518_02916	A0A0D2JHX2	A0A0D2JG04	annotation not available	annotation not available	0.806
Z518_00013	Z518_04218	A0A0D2JHX2	A0A0D2H761	annotation not available	annotation not available	0.675
Z518_00013	Z518_05042	A0A0D2JHX2	A0A0D2JD48	annotation not available	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.862
Z518_00013	Z518_05043	A0A0D2JHX2	A0A0D2IV77	annotation not available	annotation not available	0.862
Z518_00013	Z518_06177	A0A0D2JHX2	A0A0D2J894	annotation not available	annotation not available	0.837
Z518_00013	Z518_08567	A0A0D2JHX2	A0A0D2J176	annotation not available	annotation not available	0.666
Z518_00013	Z518_08769	A0A0D2JHX2	A0A0D2IHP7	annotation not available	annotation not available	0.962
Z518_00013	Z518_08770	A0A0D2JHX2	A0A0D2FLF9	annotation not available	annotation not available	0.953
Z518_00013	Z518_10621	A0A0D2JHX2	A0A0D2IB17	annotation not available	annotation not available	0.672
Z518_00013	Z518_10913	A0A0D2JHX2	A0A0D2I9R6	annotation not available	annotation not available	0.893
Z518_00013	Z518_11167	A0A0D2JHX2	A0A0D2I138	annotation not available	annotation not available	0.948
Z518_00864	Z518_00013	A0A0D2HGG8	A0A0D2JHX2	annotation not available	annotation not available	0.673
Z518_00864	Z518_01510	A0A0D2HGG8	A0A0D2HIC8	annotation not available	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.	0.793
Z518_00864	Z518_02007	A0A0D2HGG8	A0A0D2INF3	annotation not available	annotation not available	0.707
Z518_00864	Z518_02295	A0A0D2HGG8	A0A0D2FZC7	annotation not available	annotation not available	0.657
Z518_00864	Z518_02916	A0A0D2HGG8	A0A0D2JG04	annotation not available	annotation not available	0.652
Z518_00864	Z518_04218	A0A0D2HGG8	A0A0D2H761	annotation not available	annotation not available	0.698