34 items (Rhinocladiella mackenziei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_09327	annotation not available (557 aa)
	Z518_09417	annotation not available (152 aa)
	Z518_07818	annotation not available (77 aa)
	Z518_05292	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
	Z518_08799	Belongs to the DEAD box helicase family. (525 aa)
	Z518_02699	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1760 aa)
	Z518_09321	annotation not available (152 aa)
	Z518_09597	annotation not available (999 aa)
	Z518_07022	Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (356 aa)
	Z518_01443	annotation not available (735 aa)
	Z518_07513	annotation not available (119 aa)
	Z518_05182	annotation not available (336 aa)
	Z518_05293	annotation not available (345 aa)
	Z518_05872	annotation not available (379 aa)
	Z518_06187	Belongs to the cyclin family. (399 aa)
	Z518_02705	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1260 aa)
	Z518_00575	annotation not available (405 aa)
	Z518_01454	annotation not available (674 aa)
	Z518_02526	annotation not available (376 aa)
	Z518_04151	annotation not available (785 aa)
	Z518_04031	annotation not available (967 aa)
	Z518_05154	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (548 aa)
	Z518_09328	annotation not available (169 aa)
	Z518_10147	Histone H2B; Belongs to the histone H2B family. (141 aa)
	Z518_06649	Belongs to the cyclin family. (523 aa)
	Z518_01484	annotation not available (928 aa)
	Z518_07662	annotation not available (264 aa)
	Z518_07738	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (713 aa)
	Z518_06724	annotation not available (275 aa)
	Z518_07031	annotation not available (238 aa)
	Z518_05206	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
	Z518_06035	annotation not available (380 aa)
	Z518_02477	annotation not available (416 aa)
	Z518_10666	annotation not available (265 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z518_00575	Z518_01443	A0A0D2JJB8	A0A0D2J3R1	annotation not available	annotation not available	0.597
Z518_00575	Z518_01484	A0A0D2JJB8	A0A0D2G635	annotation not available	annotation not available	0.656
Z518_00575	Z518_02699	A0A0D2JJB8	A0A0D2IQ86	annotation not available	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.458
Z518_00575	Z518_02705	A0A0D2JJB8	A0A0D2JFL2	annotation not available	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.498
Z518_00575	Z518_04031	A0A0D2JJB8	A0A0D2FVC8	annotation not available	annotation not available	0.839
Z518_00575	Z518_04151	A0A0D2JJB8	A0A0D2FVI5	annotation not available	annotation not available	0.515
Z518_00575	Z518_05154	A0A0D2JJB8	A0A0D2FQ01	annotation not available	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.679
Z518_00575	Z518_05182	A0A0D2JJB8	A0A0D2J5I9	annotation not available	annotation not available	0.617
Z518_00575	Z518_05292	A0A0D2JJB8	A0A0D2IF34	annotation not available	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.621
Z518_00575	Z518_05293	A0A0D2JJB8	A0A0D2J5U8	annotation not available	annotation not available	0.621
Z518_00575	Z518_06724	A0A0D2JJB8	A0A0D2GY80	annotation not available	annotation not available	0.882
Z518_00575	Z518_07022	A0A0D2JJB8	A0A0D2J3E8	annotation not available	Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.650
Z518_00575	Z518_07031	A0A0D2JJB8	A0A0D2GZ98	annotation not available	annotation not available	0.589
Z518_00575	Z518_07513	A0A0D2JJB8	A0A0D2J4P1	annotation not available	annotation not available	0.433
Z518_00575	Z518_07662	A0A0D2JJB8	A0A0D2IE62	annotation not available	annotation not available	0.584
Z518_00575	Z518_08799	A0A0D2JJB8	A0A0D2IHS5	annotation not available	Belongs to the DEAD box helicase family.	0.630
Z518_00575	Z518_09417	A0A0D2JJB8	A0A0D2IEL0	annotation not available	annotation not available	0.576
Z518_00575	Z518_10147	A0A0D2JJB8	A0A0D2ICX1	annotation not available	Histone H2B; Belongs to the histone H2B family.	0.824
Z518_01443	Z518_00575	A0A0D2J3R1	A0A0D2JJB8	annotation not available	annotation not available	0.597
Z518_01443	Z518_01484	A0A0D2J3R1	A0A0D2G635	annotation not available	annotation not available	0.640