40 items (Rhinocladiella mackenziei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z518_07818	annotation not available (77 aa)
	Z518_09417	annotation not available (152 aa)
	Z518_09372	annotation not available (213 aa)
	Z518_09327	annotation not available (557 aa)
	Z518_07332	annotation not available (359 aa)
	Z518_10666	annotation not available (265 aa)
	Z518_08183	Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. (525 aa)
	Z518_09059	annotation not available (112 aa)
	Z518_11411	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (570 aa)
	Z518_01355	annotation not available (338 aa)
	Z518_01289	annotation not available (346 aa)
	Z518_02979	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
	Z518_02869	annotation not available (323 aa)
	Z518_04914	annotation not available (177 aa)
	Z518_06180	annotation not available (434 aa)
	Z518_05206	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
	Z518_07031	annotation not available (238 aa)
	Z518_09154	annotation not available (305 aa)
	Z518_01691	annotation not available (137 aa)
	Z518_01028	annotation not available (477 aa)
	Z518_09328	annotation not available (169 aa)
	Z518_00344	RBR-type E3 ubiquitin transferase. (715 aa)
	Z518_03106	annotation not available (186 aa)
	Z518_02705	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1260 aa)
	Z518_02389	annotation not available (470 aa)
	Z518_05182	annotation not available (336 aa)
	Z518_07513	annotation not available (119 aa)
	Z518_06997	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1736 aa)
	Z518_03237	annotation not available (162 aa)
	Z518_09466	annotation not available (373 aa)
	Z518_09321	annotation not available (152 aa)
	Z518_03047	annotation not available (426 aa)
	Z518_09760	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1585 aa)
	Z518_00227	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1214 aa)
	Z518_00077	annotation not available (583 aa)
	Z518_03773	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1211 aa)
	Z518_02699	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1760 aa)
	Z518_02363	annotation not available (439 aa)
	Z518_05334	annotation not available (533 aa)
	Z518_03988	annotation not available (862 aa)

Your Current Organism:

Rhinocladiella mackenziei

NCBI taxonomy Id: 1442369
Other names: R. mackenziei CBS 650.93, Rhinocladiella mackenziei CBS 650.93

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z518_00227	Z518_01028	A0A0D2IT04	A0A0D2G595	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.973
Z518_00227	Z518_01289	A0A0D2IT04	A0A0D2HHP8	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.970
Z518_00227	Z518_01355	A0A0D2IT04	A0A0D2HHV4	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.959
Z518_00227	Z518_01691	A0A0D2IT04	A0A0D2G6M0	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.997
Z518_00227	Z518_02363	A0A0D2IT04	A0A0D2IPB3	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.973
Z518_00227	Z518_02389	A0A0D2IT04	A0A0D2JEW3	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.998
Z518_00227	Z518_02699	A0A0D2IT04	A0A0D2IQ86	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.730
Z518_00227	Z518_02979	A0A0D2IT04	A0A0D2HCX5	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.926
Z518_00227	Z518_03047	A0A0D2IT04	A0A0D2IYC4	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.997
Z518_00227	Z518_03237	A0A0D2IT04	A0A0D2IYX6	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.970
Z518_00227	Z518_03773	A0A0D2IT04	A0A0D2IRM8	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.881
Z518_00227	Z518_03988	A0A0D2IT04	A0A0D2IK08	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.581
Z518_00227	Z518_05182	A0A0D2IT04	A0A0D2J5I9	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.980
Z518_00227	Z518_05206	A0A0D2IT04	A0A0D2H1K6	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
Z518_00227	Z518_05334	A0A0D2IT04	A0A0D2IMW5	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.996
Z518_00227	Z518_06997	A0A0D2IT04	A0A0D2J3B9	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.993
Z518_00227	Z518_07031	A0A0D2IT04	A0A0D2GZ98	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.999
Z518_00227	Z518_07513	A0A0D2IT04	A0A0D2J4P1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.730
Z518_00227	Z518_07818	A0A0D2IT04	A0A0D2IEL2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.999
Z518_00227	Z518_09154	A0A0D2IT04	A0A0D2GSU5	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	annotation not available	0.914