15 items (Fonsecaea multimorphosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z520_07590	Rab-GAP TBC domain-containing protein. (1145 aa)
	Z520_04866	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (871 aa)
	Z520_02803	PX domain-containing protein. (707 aa)
	Z520_02414	Glycosidase; Belongs to the glycosyl hydrolase 16 family. (450 aa)
	Z520_11324	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. (200 aa)
	Z520_03847	Uncharacterized protein. (327 aa)
	Z520_09115	Uncharacterized protein. (322 aa)
	Z520_08477	Sorting nexin-3. (143 aa)
	Z520_05208	PX domain-containing protein. (487 aa)
	Z520_07053	PX domain-containing protein. (628 aa)
	Z520_05410	Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. (1512 aa)
	Z520_05540	PX domain-containing protein. (586 aa)
	Z520_03770	Rab-GAP TBC domain-containing protein. (707 aa)
	Z520_09323	Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family. (620 aa)
	Z520_06360	GH16 domain-containing protein. (498 aa)

Your Current Organism:

Fonsecaea multimorphosa

NCBI taxonomy Id: 1442371
Other names: F. multimorphosa CBS 102226, Fonsecaea multimorphosa CBS 102226

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z520_02414	Z520_03847	A0A0D2HK48	A0A0D2IT82	Glycosidase; Belongs to the glycosyl hydrolase 16 family.	Uncharacterized protein.	0.553
Z520_02414	Z520_04866	A0A0D2HK48	A0A0D2HBM1	Glycosidase; Belongs to the glycosyl hydrolase 16 family.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.564
Z520_02414	Z520_05410	A0A0D2HK48	A0A0D2K741	Glycosidase; Belongs to the glycosyl hydrolase 16 family.	Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.	0.498
Z520_02414	Z520_06360	A0A0D2HK48	A0A0D2KLM2	Glycosidase; Belongs to the glycosyl hydrolase 16 family.	GH16 domain-containing protein.	0.554
Z520_02414	Z520_09115	A0A0D2HK48	A0A0D2JXE0	Glycosidase; Belongs to the glycosyl hydrolase 16 family.	Uncharacterized protein.	0.561
Z520_02414	Z520_11324	A0A0D2HK48	A0A0D2I752	Glycosidase; Belongs to the glycosyl hydrolase 16 family.	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	0.570
Z520_02803	Z520_03847	A0A0D2HH50	A0A0D2IT82	PX domain-containing protein.	Uncharacterized protein.	0.553
Z520_02803	Z520_04866	A0A0D2HH50	A0A0D2HBM1	PX domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.750
Z520_02803	Z520_05208	A0A0D2HH50	A0A0D2JYZ5	PX domain-containing protein.	PX domain-containing protein.	0.566
Z520_02803	Z520_05410	A0A0D2HH50	A0A0D2K741	PX domain-containing protein.	Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.	0.524
Z520_02803	Z520_05540	A0A0D2HH50	A0A0D2K7C8	PX domain-containing protein.	PX domain-containing protein.	0.533
Z520_02803	Z520_07053	A0A0D2HH50	A0A0D2K1T1	PX domain-containing protein.	PX domain-containing protein.	0.503
Z520_02803	Z520_08477	A0A0D2HH50	A0A0D2JYX3	PX domain-containing protein.	Sorting nexin-3.	0.566
Z520_02803	Z520_09115	A0A0D2HH50	A0A0D2JXE0	PX domain-containing protein.	Uncharacterized protein.	0.640
Z520_02803	Z520_09323	A0A0D2HH50	A0A0D2KE82	PX domain-containing protein.	Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.	0.532
Z520_02803	Z520_11324	A0A0D2HH50	A0A0D2I752	PX domain-containing protein.	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	0.624
Z520_03770	Z520_04866	A0A0D2KA78	A0A0D2HBM1	Rab-GAP TBC domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.856
Z520_03770	Z520_05540	A0A0D2KA78	A0A0D2K7C8	Rab-GAP TBC domain-containing protein.	PX domain-containing protein.	0.420
Z520_03770	Z520_07590	A0A0D2KA78	A0A0D2H4X3	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.455
Z520_03770	Z520_08477	A0A0D2KA78	A0A0D2JYX3	Rab-GAP TBC domain-containing protein.	Sorting nexin-3.	0.528