16 items (Fonsecaea multimorphosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z520_08743	Deacetylase sirtuin-type domain-containing protein. (608 aa)
	Z520_00275	Thioredoxin-like_fold domain-containing protein. (210 aa)
	Z520_00286	Uncharacterized protein. (478 aa)
	Z520_11083	Hist_deacetyl domain-containing protein. (364 aa)
	Z520_04885	HDAC_interact domain-containing protein. (1526 aa)
	Z520_02066	Histone deacetylase RPD3. (718 aa)
	Z520_01901	Uncharacterized protein. (887 aa)
	Z520_05235	Uncharacterized protein. (655 aa)
	Z520_05800	PHD-type domain-containing protein. (1241 aa)
	Z520_07243	MRG domain-containing protein. (322 aa)
	Z520_11460	FAS1 domain-containing protein. (215 aa)
	Z520_03942	Deacetylase sirtuin-type domain-containing protein. (649 aa)
	Z520_08882	RXT2_N domain-containing protein. (503 aa)
	Z520_04035	Uncharacterized protein. (684 aa)
	Z520_00271	Uncharacterized protein. (455 aa)
	Z520_03985	Uncharacterized protein. (938 aa)

Your Current Organism:

Fonsecaea multimorphosa

NCBI taxonomy Id: 1442371
Other names: F. multimorphosa CBS 102226, Fonsecaea multimorphosa CBS 102226

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z520_00271	Z520_00286	A0A0D2KJA7	A0A0D2KJC0	Uncharacterized protein.	Uncharacterized protein.	0.863
Z520_00271	Z520_01901	A0A0D2KJA7	A0A0D2K748	Uncharacterized protein.	Uncharacterized protein.	0.731
Z520_00271	Z520_02066	A0A0D2KJA7	A0A0D2K7H9	Uncharacterized protein.	Histone deacetylase RPD3.	0.885
Z520_00271	Z520_03985	A0A0D2KJA7	A0A0D2KAX6	Uncharacterized protein.	Uncharacterized protein.	0.540
Z520_00271	Z520_04035	A0A0D2KJA7	A0A0D2KB30	Uncharacterized protein.	Uncharacterized protein.	0.692
Z520_00271	Z520_05800	A0A0D2KJA7	A0A0D2K5R6	Uncharacterized protein.	PHD-type domain-containing protein.	0.835
Z520_00271	Z520_07243	A0A0D2KJA7	A0A0D2K254	Uncharacterized protein.	MRG domain-containing protein.	0.760
Z520_00271	Z520_11083	A0A0D2KJA7	A0A0D2KA04	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.731
Z520_00275	Z520_00286	A0A0D2L3F5	A0A0D2KJC0	Thioredoxin-like_fold domain-containing protein.	Uncharacterized protein.	0.863
Z520_00275	Z520_01901	A0A0D2L3F5	A0A0D2K748	Thioredoxin-like_fold domain-containing protein.	Uncharacterized protein.	0.731
Z520_00275	Z520_02066	A0A0D2L3F5	A0A0D2K7H9	Thioredoxin-like_fold domain-containing protein.	Histone deacetylase RPD3.	0.885
Z520_00275	Z520_03985	A0A0D2L3F5	A0A0D2KAX6	Thioredoxin-like_fold domain-containing protein.	Uncharacterized protein.	0.540
Z520_00275	Z520_04035	A0A0D2L3F5	A0A0D2KB30	Thioredoxin-like_fold domain-containing protein.	Uncharacterized protein.	0.692
Z520_00275	Z520_05800	A0A0D2L3F5	A0A0D2K5R6	Thioredoxin-like_fold domain-containing protein.	PHD-type domain-containing protein.	0.835
Z520_00275	Z520_07243	A0A0D2L3F5	A0A0D2K254	Thioredoxin-like_fold domain-containing protein.	MRG domain-containing protein.	0.760
Z520_00275	Z520_11083	A0A0D2L3F5	A0A0D2KA04	Thioredoxin-like_fold domain-containing protein.	Hist_deacetyl domain-containing protein.	0.731
Z520_00286	Z520_00271	A0A0D2KJC0	A0A0D2KJA7	Uncharacterized protein.	Uncharacterized protein.	0.863
Z520_00286	Z520_00275	A0A0D2KJC0	A0A0D2L3F5	Uncharacterized protein.	Thioredoxin-like_fold domain-containing protein.	0.863
Z520_00286	Z520_01901	A0A0D2KJC0	A0A0D2K748	Uncharacterized protein.	Uncharacterized protein.	0.889
Z520_00286	Z520_02066	A0A0D2KJC0	A0A0D2K7H9	Uncharacterized protein.	Histone deacetylase RPD3.	0.953