(48 nodes) rRNA binding network (Fonsecaea multimorphosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z520_04636	Brix domain-containing protein. (464 aa)
	Z520_04799	Brix domain-containing protein. (337 aa)
	Z520_04784	F-box domain-containing protein. (345 aa)
	Z520_06208	Uncharacterized protein. (510 aa)
	Z520_00712	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (250 aa)
	Z520_02057	60S ribosomal protein L23-B; Belongs to the universal ribosomal protein uL14 family. (115 aa)
	Z520_01404	Uncharacterized protein. (155 aa)
	Z520_07167	Uncharacterized protein. (456 aa)
	Z520_09980	60S ribosomal protein L2-A. (254 aa)
	Z520_11634	Zn(2)-C6 fungal-type domain-containing protein. (902 aa)
	Z520_08501	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (193 aa)
	Z520_01933	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (153 aa)
	Z520_10408	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (162 aa)
	Z520_11215	S4 RNA-binding domain-containing protein. (188 aa)
	Z520_02221	Uncharacterized protein. (757 aa)
	Z520_05290	Uncharacterized protein. (284 aa)
	Z520_02865	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (473 aa)
	Z520_03729	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (215 aa)
	Z520_08274	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (581 aa)
	Z520_05308	Brix domain-containing protein. (384 aa)
	Z520_08502	Uncharacterized protein. (300 aa)
	Z520_09640	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. (269 aa)
	Z520_07352	S4 RNA-binding domain-containing protein. (439 aa)
	Z520_07622	Ribosomal_L23eN domain-containing protein. (165 aa)
	Z520_10997	Uncharacterized protein. (354 aa)
	Z520_10957	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (175 aa)
	Z520_07975	60S ribosomal protein L5. (300 aa)
	Z520_08777	Uncharacterized protein. (271 aa)
	Z520_11899	Uncharacterized protein. (131 aa)
	Z520_09962	Brix domain-containing protein. (441 aa)
	Z520_12206	Uncharacterized protein. (304 aa)
	Z520_00343	Uncharacterized protein. (316 aa)
	Z520_00318	Ribosomal RNA small subunit methyltransferase NEP1. (260 aa)
	Z520_02659	Uncharacterized protein. (327 aa)
	Z520_04717	Brix domain-containing protein. (296 aa)
	Z520_05807	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (128 aa)
	Z520_08953	Uncharacterized protein. (195 aa)
	Z520_12047	40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (162 aa)
	Z520_00633	Uncharacterized protein. (1803 aa)
	Z520_01346	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (167 aa)
	Z520_02708	Uncharacterized protein. (109 aa)
	Z520_03487	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	Z520_04126	Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family. (272 aa)
	Z520_04056	Ribosomal_S7 domain-containing protein. (392 aa)
	Z520_05396	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	Z520_07294	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (264 aa)
	Z520_07841	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (306 aa)
	Z520_07686	Uncharacterized protein. (172 aa)

Your Current Organism:

Fonsecaea multimorphosa

NCBI taxonomy Id: 1442371
Other names: F. multimorphosa CBS 102226, Fonsecaea multimorphosa CBS 102226

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z520_00318	Z520_00343	A0A0D2J2G2	A0A0D2J2I1	Ribosomal RNA small subunit methyltransferase NEP1.	Uncharacterized protein.	0.941
Z520_00318	Z520_00633	A0A0D2J2G2	A0A0D2HPZ7	Ribosomal RNA small subunit methyltransferase NEP1.	Uncharacterized protein.	0.998
Z520_00318	Z520_00712	A0A0D2J2G2	A0A0D2KKL6	Ribosomal RNA small subunit methyltransferase NEP1.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.793
Z520_00318	Z520_01404	A0A0D2J2G2	A0A0D2L1N4	Ribosomal RNA small subunit methyltransferase NEP1.	Uncharacterized protein.	0.912
Z520_00318	Z520_02221	A0A0D2J2G2	A0A0D2K7Q6	Ribosomal RNA small subunit methyltransferase NEP1.	Uncharacterized protein.	0.441
Z520_00318	Z520_02659	A0A0D2J2G2	A0A0D2IVM1	Ribosomal RNA small subunit methyltransferase NEP1.	Uncharacterized protein.	0.944
Z520_00318	Z520_03487	A0A0D2J2G2	A0A0D2HFZ4	Ribosomal RNA small subunit methyltransferase NEP1.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.998
Z520_00318	Z520_03729	A0A0D2J2G2	A0A0D2K5I1	Ribosomal RNA small subunit methyltransferase NEP1.	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.983
Z520_00318	Z520_04056	A0A0D2J2G2	A0A0D2HES1	Ribosomal RNA small subunit methyltransferase NEP1.	Ribosomal_S7 domain-containing protein.	0.968
Z520_00318	Z520_04636	A0A0D2J2G2	A0A0D2KTC7	Ribosomal RNA small subunit methyltransferase NEP1.	Brix domain-containing protein.	0.440
Z520_00318	Z520_04717	A0A0D2J2G2	A0A0D2IQA4	Ribosomal RNA small subunit methyltransferase NEP1.	Brix domain-containing protein.	0.987
Z520_00318	Z520_04784	A0A0D2J2G2	A0A0D2KR72	Ribosomal RNA small subunit methyltransferase NEP1.	F-box domain-containing protein.	0.695
Z520_00318	Z520_04799	A0A0D2J2G2	A0A0D2KR80	Ribosomal RNA small subunit methyltransferase NEP1.	Brix domain-containing protein.	0.695
Z520_00318	Z520_05308	A0A0D2J2G2	A0A0D2JZA1	Ribosomal RNA small subunit methyltransferase NEP1.	Brix domain-containing protein.	0.849
Z520_00318	Z520_05396	A0A0D2J2G2	A0A0D2HAN9	Ribosomal RNA small subunit methyltransferase NEP1.	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.978
Z520_00318	Z520_07294	A0A0D2J2G2	A0A0D2H5P9	Ribosomal RNA small subunit methyltransferase NEP1.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.925
Z520_00318	Z520_07352	A0A0D2J2G2	A0A0D2JUT5	Ribosomal RNA small subunit methyltransferase NEP1.	S4 RNA-binding domain-containing protein.	0.970
Z520_00318	Z520_07841	A0A0D2J2G2	A0A0D2H405	Ribosomal RNA small subunit methyltransferase NEP1.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.528
Z520_00318	Z520_08274	A0A0D2J2G2	A0A0D2JZJ9	Ribosomal RNA small subunit methyltransferase NEP1.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.421
Z520_00318	Z520_08501	A0A0D2J2G2	A0A0D2KGK2	Ribosomal RNA small subunit methyltransferase NEP1.	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.999