11 items (Fonsecaea multimorphosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z520_06881	DNA polymerase. (1699 aa)
	Z520_07329	UmuC domain-containing protein. (590 aa)
	Z520_05603	Uncharacterized protein. (1180 aa)
	Z520_07893	Vezatin domain-containing protein. (591 aa)
	Z520_10831	WLM domain-containing protein. (542 aa)
	Z520_07732	DNA_pol_E_B domain-containing protein. (854 aa)
	Z520_10532	UmuC domain-containing protein. (654 aa)
	Z520_10865	BRCT domain-containing protein. (741 aa)
	Z520_02723	HORMA domain-containing protein. (315 aa)
	Z520_07891	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
	Z520_10465	UmuC domain-containing protein. (695 aa)

Your Current Organism:

Fonsecaea multimorphosa

NCBI taxonomy Id: 1442371
Other names: F. multimorphosa CBS 102226, Fonsecaea multimorphosa CBS 102226

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z520_02723	Z520_05603	A0A0D2HGW8	A0A0D2JXM5	HORMA domain-containing protein.	Uncharacterized protein.	0.996
Z520_02723	Z520_06881	A0A0D2HGW8	A0A0D2K2Y6	HORMA domain-containing protein.	DNA polymerase.	0.999
Z520_02723	Z520_07329	A0A0D2HGW8	A0A0D2K2C8	HORMA domain-containing protein.	UmuC domain-containing protein.	0.915
Z520_02723	Z520_07891	A0A0D2HGW8	A0A0D2H452	HORMA domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.773
Z520_02723	Z520_07893	A0A0D2HGW8	A0A0D2JT28	HORMA domain-containing protein.	Vezatin domain-containing protein.	0.773
Z520_02723	Z520_10465	A0A0D2HGW8	A0A0D2GW57	HORMA domain-containing protein.	UmuC domain-containing protein.	0.916
Z520_02723	Z520_10532	A0A0D2HGW8	A0A0D2I8V7	HORMA domain-containing protein.	UmuC domain-containing protein.	0.978
Z520_05603	Z520_02723	A0A0D2JXM5	A0A0D2HGW8	Uncharacterized protein.	HORMA domain-containing protein.	0.996
Z520_05603	Z520_06881	A0A0D2JXM5	A0A0D2K2Y6	Uncharacterized protein.	DNA polymerase.	0.991
Z520_05603	Z520_07329	A0A0D2JXM5	A0A0D2K2C8	Uncharacterized protein.	UmuC domain-containing protein.	0.954
Z520_05603	Z520_07732	A0A0D2JXM5	A0A0D2IHG9	Uncharacterized protein.	DNA_pol_E_B domain-containing protein.	0.643
Z520_05603	Z520_07891	A0A0D2JXM5	A0A0D2H452	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.959
Z520_05603	Z520_07893	A0A0D2JXM5	A0A0D2JT28	Uncharacterized protein.	Vezatin domain-containing protein.	0.959
Z520_05603	Z520_10465	A0A0D2JXM5	A0A0D2GW57	Uncharacterized protein.	UmuC domain-containing protein.	0.981
Z520_05603	Z520_10532	A0A0D2JXM5	A0A0D2I8V7	Uncharacterized protein.	UmuC domain-containing protein.	0.993
Z520_05603	Z520_10865	A0A0D2JXM5	A0A0D2I8E4	Uncharacterized protein.	BRCT domain-containing protein.	0.402
Z520_06881	Z520_02723	A0A0D2K2Y6	A0A0D2HGW8	DNA polymerase.	HORMA domain-containing protein.	0.999
Z520_06881	Z520_05603	A0A0D2K2Y6	A0A0D2JXM5	DNA polymerase.	Uncharacterized protein.	0.991
Z520_06881	Z520_07329	A0A0D2K2Y6	A0A0D2K2C8	DNA polymerase.	UmuC domain-containing protein.	0.914
Z520_06881	Z520_07732	A0A0D2K2Y6	A0A0D2IHG9	DNA polymerase.	DNA_pol_E_B domain-containing protein.	0.963