9 items (Fonsecaea multimorphosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z520_04112	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. (167 aa)
	URM1	Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3 homolog UBA4. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target pr [...] (105 aa)
	Z520_01629	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	Z520_12397	Uncharacterized protein. (121 aa)
	Z520_08891	Ubiquitin-like domain-containing protein. (101 aa)
	Z520_05458	Polyubiquitin. (229 aa)
	Z520_06377	RRN7-type domain-containing protein. (625 aa)
	Z520_08713	BZIP domain-containing protein. (447 aa)
	Z520_04626	Uncharacterized protein. (218 aa)

Your Current Organism:

Fonsecaea multimorphosa

NCBI taxonomy Id: 1442371
Other names: F. multimorphosa CBS 102226, Fonsecaea multimorphosa CBS 102226

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z520_01629	Z520_05458	A0A0D2J1A0	A0A0D2JZR2	Ubiquitin-40S ribosomal protein S27a.	Polyubiquitin.	0.976
Z520_01629	Z520_06377	A0A0D2J1A0	A0A0D2K383	Ubiquitin-40S ribosomal protein S27a.	RRN7-type domain-containing protein.	0.996
Z520_01629	Z520_08891	A0A0D2J1A0	A0A0D2JXZ6	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-like domain-containing protein.	0.811
Z520_04112	Z520_08891	A0A0D2ITZ7	A0A0D2JXZ6	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.	Ubiquitin-like domain-containing protein.	0.508
Z520_04626	Z520_08891	A0A0D2KTC2	A0A0D2JXZ6	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.521
Z520_05458	Z520_01629	A0A0D2JZR2	A0A0D2J1A0	Polyubiquitin.	Ubiquitin-40S ribosomal protein S27a.	0.976
Z520_05458	Z520_06377	A0A0D2JZR2	A0A0D2K383	Polyubiquitin.	RRN7-type domain-containing protein.	0.997
Z520_05458	Z520_08713	A0A0D2JZR2	A0A0D2KFZ3	Polyubiquitin.	BZIP domain-containing protein.	0.970
Z520_05458	Z520_08891	A0A0D2JZR2	A0A0D2JXZ6	Polyubiquitin.	Ubiquitin-like domain-containing protein.	0.859
Z520_05458	Z520_12397	A0A0D2JZR2	A0A0D2JFD4	Polyubiquitin.	Uncharacterized protein.	0.878
Z520_06377	Z520_01629	A0A0D2K383	A0A0D2J1A0	RRN7-type domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.996
Z520_06377	Z520_05458	A0A0D2K383	A0A0D2JZR2	RRN7-type domain-containing protein.	Polyubiquitin.	0.997
Z520_06377	Z520_08713	A0A0D2K383	A0A0D2KFZ3	RRN7-type domain-containing protein.	BZIP domain-containing protein.	0.995
Z520_06377	Z520_08891	A0A0D2K383	A0A0D2JXZ6	RRN7-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.833
Z520_06377	Z520_12397	A0A0D2K383	A0A0D2JFD4	RRN7-type domain-containing protein.	Uncharacterized protein.	0.949
Z520_08713	Z520_05458	A0A0D2KFZ3	A0A0D2JZR2	BZIP domain-containing protein.	Polyubiquitin.	0.970
Z520_08713	Z520_06377	A0A0D2KFZ3	A0A0D2K383	BZIP domain-containing protein.	RRN7-type domain-containing protein.	0.995
Z520_08713	Z520_08891	A0A0D2KFZ3	A0A0D2JXZ6	BZIP domain-containing protein.	Ubiquitin-like domain-containing protein.	0.811
Z520_08891	Z520_01629	A0A0D2JXZ6	A0A0D2J1A0	Ubiquitin-like domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.811
Z520_08891	Z520_04112	A0A0D2JXZ6	A0A0D2ITZ7	Ubiquitin-like domain-containing protein.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.	0.508