5 items (Fonsecaea multimorphosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z520_11152	Uncharacterized protein. (1034 aa)
	Z520_07034	Uncharacterized protein. (947 aa)
	Z520_06428	Uncharacterized protein. (870 aa)
	Z520_07050	Uncharacterized protein. (430 aa)
	Z520_02864	Uncharacterized protein. (846 aa)

Your Current Organism:

Fonsecaea multimorphosa

NCBI taxonomy Id: 1442371
Other names: F. multimorphosa CBS 102226, Fonsecaea multimorphosa CBS 102226

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z520_02864	Z520_06428	A0A0D2IW94	A0A0D2H705	Uncharacterized protein.	Uncharacterized protein.	0.779
Z520_06428	Z520_02864	A0A0D2H705	A0A0D2IW94	Uncharacterized protein.	Uncharacterized protein.	0.779
Z520_06428	Z520_07034	A0A0D2H705	A0A0D2H542	Uncharacterized protein.	Uncharacterized protein.	0.779
Z520_06428	Z520_07050	A0A0D2H705	A0A0D2IIW7	Uncharacterized protein.	Uncharacterized protein.	0.779
Z520_06428	Z520_11152	A0A0D2H705	A0A0D2GUA1	Uncharacterized protein.	Uncharacterized protein.	0.779
Z520_07034	Z520_06428	A0A0D2H542	A0A0D2H705	Uncharacterized protein.	Uncharacterized protein.	0.779
Z520_07050	Z520_06428	A0A0D2IIW7	A0A0D2H705	Uncharacterized protein.	Uncharacterized protein.	0.779
Z520_11152	Z520_06428	A0A0D2GUA1	A0A0D2H705	Uncharacterized protein.	Uncharacterized protein.	0.779