19 items (Fonsecaea multimorphosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z520_05244	Uncharacterized protein. (792 aa)
	Z520_08088	Rab-GAP TBC domain-containing protein. (449 aa)
	Z520_07590	Rab-GAP TBC domain-containing protein. (1145 aa)
	Z520_04361	Rab-GAP TBC domain-containing protein. (895 aa)
	Z520_01698	UDENN FLCN/SMCR8-type domain-containing protein. (583 aa)
	Z520_11489	Uncharacterized protein. (423 aa)
	Z520_11168	Uncharacterized protein. (947 aa)
	Z520_11403	Rab-GAP TBC domain-containing protein. (1039 aa)
	Z520_10967	Rab-GAP TBC domain-containing protein. (889 aa)
	Z520_07718	Rab-GAP TBC domain-containing protein. (606 aa)
	Z520_06147	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family. (508 aa)
	Z520_06197	Rap-GAP domain-containing protein. (1425 aa)
	Z520_08487	Rab-GAP TBC domain-containing protein. (416 aa)
	Z520_07900	Rho-GAP domain-containing protein. (839 aa)
	Z520_06647	Rho-GAP domain-containing protein. (686 aa)
	Z520_11847	Uncharacterized protein. (1235 aa)
	Z520_04380	Rab-GAP TBC domain-containing protein. (861 aa)
	Z520_03770	Rab-GAP TBC domain-containing protein. (707 aa)
	Z520_02752	Uncharacterized protein. (800 aa)

Your Current Organism:

Fonsecaea multimorphosa

NCBI taxonomy Id: 1442371
Other names: F. multimorphosa CBS 102226, Fonsecaea multimorphosa CBS 102226

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z520_01698	Z520_06197	A0A0D2HN10	A0A0D2JX18	UDENN FLCN/SMCR8-type domain-containing protein.	Rap-GAP domain-containing protein.	0.544
Z520_03770	Z520_07590	A0A0D2KA78	A0A0D2H4X3	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.455
Z520_03770	Z520_07718	A0A0D2KA78	A0A0D2JSK9	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.566
Z520_03770	Z520_08487	A0A0D2KA78	A0A0D2JYY7	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.557
Z520_06197	Z520_01698	A0A0D2JX18	A0A0D2HN10	Rap-GAP domain-containing protein.	UDENN FLCN/SMCR8-type domain-containing protein.	0.544
Z520_06647	Z520_07900	A0A0D2K3W7	A0A0D2K0V7	Rho-GAP domain-containing protein.	Rho-GAP domain-containing protein.	0.458
Z520_07590	Z520_03770	A0A0D2H4X3	A0A0D2KA78	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.455
Z520_07590	Z520_07718	A0A0D2H4X3	A0A0D2JSK9	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.520
Z520_07590	Z520_08487	A0A0D2H4X3	A0A0D2JYY7	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.521
Z520_07718	Z520_03770	A0A0D2JSK9	A0A0D2KA78	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.566
Z520_07718	Z520_07590	A0A0D2JSK9	A0A0D2H4X3	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.520
Z520_07718	Z520_08487	A0A0D2JSK9	A0A0D2JYY7	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.584
Z520_07900	Z520_06647	A0A0D2K0V7	A0A0D2K3W7	Rho-GAP domain-containing protein.	Rho-GAP domain-containing protein.	0.458
Z520_08487	Z520_03770	A0A0D2JYY7	A0A0D2KA78	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.557
Z520_08487	Z520_07590	A0A0D2JYY7	A0A0D2H4X3	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.521
Z520_08487	Z520_07718	A0A0D2JYY7	A0A0D2JSK9	Rab-GAP TBC domain-containing protein.	Rab-GAP TBC domain-containing protein.	0.584