(25 nodes) post-mRNA release spliceosomal complex network (Fonsecaea multimorphosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z520_01636	Uncharacterized protein. (513 aa)
	Z520_12245	Uncharacterized protein. (561 aa)
	Z520_08947	Uncharacterized protein. (693 aa)
	Z520_07811	Uncharacterized protein. (374 aa)
	Z520_03371	Uncharacterized protein. (456 aa)
	Z520_02873	Uncharacterized protein. (381 aa)
	Z520_01136	Pre-mRNA-splicing factor slt11. (383 aa)
	Z520_10258	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1418 aa)
	Z520_07852	Sde2_N_Ubi domain-containing protein. (341 aa)
	Z520_07481	Uncharacterized protein. (446 aa)
	Z520_02639	Uncharacterized protein. (248 aa)
	Z520_00659	Pre-mRNA-splicing factor syf1. (853 aa)
	Z520_00874	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (765 aa)
	Z520_11777	Uncharacterized protein. (605 aa)
	Z520_09068	Pre-mRNA-splicing factor clf1. (680 aa)
	Z520_06769	G-patch domain-containing protein. (666 aa)
	Z520_07058	Uncharacterized protein. (331 aa)
	Z520_03196	C2H2-type domain-containing protein. (167 aa)
	Z520_03373	Small nuclear ribonucleoprotein G. (80 aa)
	Z520_06174	Sm domain-containing protein. (93 aa)
	Z520_12151	RRM domain-containing protein. (458 aa)
	Z520_02041	Pre-mRNA-splicing factor isy1. (252 aa)
	Z520_01103	Uncharacterized protein. (207 aa)
	Z520_07548	Uncharacterized protein. (484 aa)
	Z520_06333	Uncharacterized protein. (215 aa)

Your Current Organism:

Fonsecaea multimorphosa

NCBI taxonomy Id: 1442371
Other names: F. multimorphosa CBS 102226, Fonsecaea multimorphosa CBS 102226

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z520_00659	Z520_00874	A0A0D2J3K9	A0A0D2J416	Pre-mRNA-splicing factor syf1.	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43.	0.960
Z520_00659	Z520_01103	A0A0D2J3K9	A0A0D2K987	Pre-mRNA-splicing factor syf1.	Uncharacterized protein.	0.960
Z520_00659	Z520_01136	A0A0D2J3K9	A0A0D2HL67	Pre-mRNA-splicing factor syf1.	Pre-mRNA-splicing factor slt11.	0.999
Z520_00659	Z520_01636	A0A0D2J3K9	A0A0D2L275	Pre-mRNA-splicing factor syf1.	Uncharacterized protein.	0.471
Z520_00659	Z520_02041	A0A0D2J3K9	A0A0D2K7G8	Pre-mRNA-splicing factor syf1.	Pre-mRNA-splicing factor isy1.	0.999
Z520_00659	Z520_02639	A0A0D2J3K9	A0A0D2IVK1	Pre-mRNA-splicing factor syf1.	Uncharacterized protein.	0.989
Z520_00659	Z520_03196	A0A0D2J3K9	A0A0D2K3Z4	Pre-mRNA-splicing factor syf1.	C2H2-type domain-containing protein.	0.850
Z520_00659	Z520_03373	A0A0D2J3K9	A0A0D2K4G1	Pre-mRNA-splicing factor syf1.	Small nuclear ribonucleoprotein G.	0.933
Z520_00659	Z520_06174	A0A0D2J3K9	A0A0D2K4J6	Pre-mRNA-splicing factor syf1.	Sm domain-containing protein.	0.945
Z520_00659	Z520_06333	A0A0D2J3K9	A0A0D2KNF5	Pre-mRNA-splicing factor syf1.	Uncharacterized protein.	0.427
Z520_00659	Z520_06769	A0A0D2J3K9	A0A0D2JV15	Pre-mRNA-splicing factor syf1.	G-patch domain-containing protein.	0.940
Z520_00659	Z520_07058	A0A0D2J3K9	A0A0D2K1T6	Pre-mRNA-splicing factor syf1.	Uncharacterized protein.	0.997
Z520_00659	Z520_07481	A0A0D2J3K9	A0A0D2IIA1	Pre-mRNA-splicing factor syf1.	Uncharacterized protein.	0.989
Z520_00659	Z520_07548	A0A0D2J3K9	A0A0D2KJT0	Pre-mRNA-splicing factor syf1.	Uncharacterized protein.	0.534
Z520_00659	Z520_07852	A0A0D2J3K9	A0A0D2IHR8	Pre-mRNA-splicing factor syf1.	Sde2_N_Ubi domain-containing protein.	0.737
Z520_00659	Z520_08947	A0A0D2J3K9	A0A0D2H0W5	Pre-mRNA-splicing factor syf1.	Uncharacterized protein.	0.935
Z520_00659	Z520_09068	A0A0D2J3K9	A0A0D2JP67	Pre-mRNA-splicing factor syf1.	Pre-mRNA-splicing factor clf1.	0.999
Z520_00659	Z520_10258	A0A0D2J3K9	A0A0D2I9U1	Pre-mRNA-splicing factor syf1.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.999
Z520_00659	Z520_12151	A0A0D2J3K9	A0A0D2K731	Pre-mRNA-splicing factor syf1.	RRM domain-containing protein.	0.471
Z520_00874	Z520_00659	A0A0D2J416	A0A0D2J3K9	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43.	Pre-mRNA-splicing factor syf1.	0.960