37 items (Fonsecaea multimorphosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z520_07547	Uncharacterized protein. (1235 aa)
	Z520_00450	FAD_binding_3 domain-containing protein. (553 aa)
	Z520_00270	TPT domain-containing protein. (421 aa)
	Z520_00070	FAD_binding_3 domain-containing protein. (468 aa)
	Z520_02826	FAD_binding_3 domain-containing protein. (550 aa)
	Z520_03212	Uncharacterized protein. (549 aa)
	Z520_06725	Uncharacterized protein. (681 aa)
	Z520_08363	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1118 aa)
	Z520_01175	Plus3 domain-containing protein. (616 aa)
	Z520_02912	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (103 aa)
	Z520_00349	SGNH_hydro domain-containing protein. (281 aa)
	Z520_00329	Uncharacterized protein. (628 aa)
	Z520_00304	Uncharacterized protein. (308 aa)
	Z520_00204	Uncharacterized protein; Belongs to the cyclin family. (519 aa)
	Z520_11627	CID domain-containing protein. (274 aa)
	Z520_12310	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (130 aa)
	Z520_05970	Protein kinase domain-containing protein. (770 aa)
	Z520_05705	FAD_binding_3 domain-containing protein. (611 aa)
	Z520_06209	Serine/threonine-protein kinase bur1. (639 aa)
	Z520_07091	Uncharacterized protein. (497 aa)
	Z520_07467	FAD_binding_3 domain-containing protein. (607 aa)
	Z520_11176	Uncharacterized protein. (400 aa)
	Z520_11601	FAD_binding_3 domain-containing protein. (581 aa)
	Z520_11536	FAD_binding_3 domain-containing protein. (620 aa)
	Z520_06399	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (582 aa)
	Z520_07410	Uncharacterized protein. (275 aa)
	Z520_08933	FAD_binding_3 domain-containing protein. (614 aa)
	Z520_09862	WD_REPEATS_REGION domain-containing protein. (407 aa)
	Z520_02204	FAD_binding_3 domain-containing protein. (540 aa)
	Z520_02823	FAD_binding_3 domain-containing protein. (612 aa)
	Z520_03361	CDC73_C domain-containing protein. (445 aa)
	Z520_03991	FAD_binding_3 domain-containing protein. (593 aa)
	Z520_06473	HMG box domain-containing protein. (570 aa)
	Z520_07741	SGNH_hydro domain-containing protein. (267 aa)
	Z520_08018	Uncharacterized protein; Belongs to the cyclin family. (612 aa)
	Z520_10161	Uncharacterized protein. (1025 aa)
	Z520_10546	CFEM domain-containing protein. (281 aa)

Your Current Organism:

Fonsecaea multimorphosa

NCBI taxonomy Id: 1442371
Other names: F. multimorphosa CBS 102226, Fonsecaea multimorphosa CBS 102226

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z520_00204	Z520_00304	A0A0D2KBR4	A0A0D2KBX8	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein.	0.799
Z520_00204	Z520_01175	A0A0D2KBR4	A0A0D2KGV7	Uncharacterized protein; Belongs to the cyclin family.	Plus3 domain-containing protein.	0.451
Z520_00204	Z520_03212	A0A0D2KBR4	A0A0D2KUX1	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein.	0.403
Z520_00204	Z520_03361	A0A0D2KBR4	A0A0D2HFH9	Uncharacterized protein; Belongs to the cyclin family.	CDC73_C domain-containing protein.	0.684
Z520_00204	Z520_05970	A0A0D2KBR4	A0A0D2K649	Uncharacterized protein; Belongs to the cyclin family.	Protein kinase domain-containing protein.	0.975
Z520_00204	Z520_06209	A0A0D2KBR4	A0A0D2K4N2	Uncharacterized protein; Belongs to the cyclin family.	Serine/threonine-protein kinase bur1.	0.992
Z520_00204	Z520_06399	A0A0D2KBR4	A0A0D2IKS9	Uncharacterized protein; Belongs to the cyclin family.	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]	0.728
Z520_00204	Z520_06473	A0A0D2KBR4	A0A0D2H758	Uncharacterized protein; Belongs to the cyclin family.	HMG box domain-containing protein.	0.619
Z520_00204	Z520_07091	A0A0D2KBR4	A0A0D2JU13	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein.	0.595
Z520_00204	Z520_07410	A0A0D2KBR4	A0A0D2II21	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein.	0.760
Z520_00204	Z520_07547	A0A0D2KBR4	A0A0D2JTK6	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein.	0.563
Z520_00204	Z520_08018	A0A0D2KBR4	A0A0D2H313	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein; Belongs to the cyclin family.	0.817
Z520_00204	Z520_08363	A0A0D2KBR4	A0A0D2KHF0	Uncharacterized protein; Belongs to the cyclin family.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.888
Z520_00204	Z520_10161	A0A0D2KBR4	A0A0D2GX02	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein.	0.727
Z520_00204	Z520_10546	A0A0D2KBR4	A0A0D2GVK1	Uncharacterized protein; Belongs to the cyclin family.	CFEM domain-containing protein.	0.770
Z520_00204	Z520_11176	A0A0D2KBR4	A0A0D2JRP4	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein.	0.714
Z520_00204	Z520_11627	A0A0D2KBR4	A0A0D2K8D7	Uncharacterized protein; Belongs to the cyclin family.	CID domain-containing protein.	0.806
Z520_00304	Z520_00204	A0A0D2KBX8	A0A0D2KBR4	Uncharacterized protein.	Uncharacterized protein; Belongs to the cyclin family.	0.799
Z520_00304	Z520_00329	A0A0D2KBX8	A0A0D2KBZ3	Uncharacterized protein.	Uncharacterized protein.	0.722
Z520_00304	Z520_01175	A0A0D2KBX8	A0A0D2KGV7	Uncharacterized protein.	Plus3 domain-containing protein.	0.879