8 items (Fonsecaea multimorphosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Z520_04608	BTB domain-containing protein. (245 aa)
	Z520_02894	SCD domain-containing protein. (1220 aa)
	Z520_10653	Rad21_Rec8_N domain-containing protein. (714 aa)
	Z520_07790	Structural maintenance of chromosomes protein. (1207 aa)
	Z520_05585	Uncharacterized protein. (604 aa)
	Z520_04607	BTB domain-containing protein. (274 aa)
	Z520_10599	Structural maintenance of chromosomes protein. (1256 aa)
	Z520_10639	Uncharacterized protein. (315 aa)

Your Current Organism:

Fonsecaea multimorphosa

NCBI taxonomy Id: 1442371
Other names: F. multimorphosa CBS 102226, Fonsecaea multimorphosa CBS 102226

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Z520_02894	Z520_04607	A0A0D2IWG3	A0A0D2KA05	SCD domain-containing protein.	BTB domain-containing protein.	0.963
Z520_02894	Z520_04608	A0A0D2IWG3	A0A0D2HDK6	SCD domain-containing protein.	BTB domain-containing protein.	0.963
Z520_02894	Z520_05585	A0A0D2IWG3	A0A0D2K541	SCD domain-containing protein.	Uncharacterized protein.	0.999
Z520_02894	Z520_07790	A0A0D2IWG3	A0A0D2K0N7	SCD domain-containing protein.	Structural maintenance of chromosomes protein.	0.999
Z520_02894	Z520_10599	A0A0D2IWG3	A0A0D2KAX0	SCD domain-containing protein.	Structural maintenance of chromosomes protein.	0.977
Z520_02894	Z520_10639	A0A0D2IWG3	A0A0D2KAZ4	SCD domain-containing protein.	Uncharacterized protein.	0.977
Z520_02894	Z520_10653	A0A0D2IWG3	A0A0D2JKE9	SCD domain-containing protein.	Rad21_Rec8_N domain-containing protein.	0.989
Z520_04607	Z520_02894	A0A0D2KA05	A0A0D2IWG3	BTB domain-containing protein.	SCD domain-containing protein.	0.963
Z520_04607	Z520_05585	A0A0D2KA05	A0A0D2K541	BTB domain-containing protein.	Uncharacterized protein.	0.963
Z520_04607	Z520_07790	A0A0D2KA05	A0A0D2K0N7	BTB domain-containing protein.	Structural maintenance of chromosomes protein.	0.960
Z520_04607	Z520_10653	A0A0D2KA05	A0A0D2JKE9	BTB domain-containing protein.	Rad21_Rec8_N domain-containing protein.	0.914
Z520_04608	Z520_02894	A0A0D2HDK6	A0A0D2IWG3	BTB domain-containing protein.	SCD domain-containing protein.	0.963
Z520_04608	Z520_05585	A0A0D2HDK6	A0A0D2K541	BTB domain-containing protein.	Uncharacterized protein.	0.963
Z520_04608	Z520_07790	A0A0D2HDK6	A0A0D2K0N7	BTB domain-containing protein.	Structural maintenance of chromosomes protein.	0.960
Z520_04608	Z520_10653	A0A0D2HDK6	A0A0D2JKE9	BTB domain-containing protein.	Rad21_Rec8_N domain-containing protein.	0.914
Z520_05585	Z520_02894	A0A0D2K541	A0A0D2IWG3	Uncharacterized protein.	SCD domain-containing protein.	0.999
Z520_05585	Z520_04607	A0A0D2K541	A0A0D2KA05	Uncharacterized protein.	BTB domain-containing protein.	0.963
Z520_05585	Z520_04608	A0A0D2K541	A0A0D2HDK6	Uncharacterized protein.	BTB domain-containing protein.	0.963
Z520_05585	Z520_07790	A0A0D2K541	A0A0D2K0N7	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.999
Z520_05585	Z520_10599	A0A0D2K541	A0A0D2KAX0	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.992